RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 SCMH1Q96GD3 660 aa20.89■□□□□ 0.93
SKP1-206ENST00000519321 LCORQ96JN0 433 aaPredicted RBP20.89■□□□□ 0.93
SKP1-206ENST00000519321 CLMPQ9H6B4 373 aa20.89■□□□□ 0.93
SKP1-206ENST00000519321 NEUROD4Q9HD90 331 aa20.89■□□□□ 0.93
SKP1-206ENST00000519321 CNTRLQ7Z7A1 2325 aa20.89■□□□□ 0.93
SKP1-206ENST00000519321 TTC36A6NLP5 189 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 E9PBE3 544 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 UPK1AO00322 258 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 OR6B1O95007 311 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 NADKO95544 446 aaPredicted RBP20.88■□□□□ 0.93
SKP1-206ENST00000519321 SP1P08047 785 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 DRD5P21918 477 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 RTL4Q6ZR62 310 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 GOLM1Q8NBJ4 401 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 FAM98AQ8NCA5 519 aaKnown RBP20.88■□□□□ 0.93
SKP1-206ENST00000519321 SIMC1Q8NDZ2 872 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 ITPAQ9BY32 194 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 FOLH1BQ9HBA9 442 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 ZIM2Q9NZV7 527 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 NTMQ9P121 344 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 LUZP4Q9P127 313 aa20.88■□□□□ 0.93
SKP1-206ENST00000519321 FRG2CA6NGY1 282 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 RNASET2O00584 256 aaKnown RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 EMC8O43402 210 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 SLC28A2O43868 658 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 TROVE2P10155 538 aaKnown RBP eCLIP20.87■□□□□ 0.93
SKP1-206ENST00000519321 NAGAP17050 411 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 STX1BP61266 288 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 UFM1P61960 85 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 PRR5P85299 388 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 ZNHIT3Q15649 155 aaPredicted RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 COLEC12Q5KU26 742 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 ZNF605Q86T29 641 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 PSMA8Q8TAA3 256 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 SPACA9Q96E40 222 aaPredicted RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 MAGED4Q96JG8 741 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 VSTM2LQ96N03 204 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 BTBD9Q96Q07 612 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 EBF4Q9BQW3 602 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 NXF5Q9H1B4 397 aaKnown RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 EPN3Q9H201 632 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 ANKRA2Q9H9E1 313 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 PCDHGB4Q9UN71 923 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 DTX4Q9Y2E6 619 aa20.87■□□□□ 0.93
SKP1-206ENST00000519321 GPR55Q9Y2T6 319 aaPredicted RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 KLF13Q9Y2Y9 288 aaPredicted RBP20.87■□□□□ 0.93
SKP1-206ENST00000519321 PRSS51A0A1B0GVH4 220 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 NME2P1O60361 137 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 ERN1O75460 977 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 SLC22A3O75751 556 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 PSMG1O95456 288 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 VIMP08670 466 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 FBXO45P0C2W1 286 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 NME2P22392 152 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 S100A3P33764 101 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 ST13P50502 369 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 CDK9P50750 372 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 LRRC74AQ0VAA2 488 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 MAPKAPK3Q16644 382 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 TMEM198Q66K66 360 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 OR4F3Q6IEY1 312 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 ZNF227Q86WZ6 799 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 MIER2Q8N344 545 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 MOAP1Q96BY2 351 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 NPHS2Q9NP85 383 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 KLHL1Q9NR64 748 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 SDR39U1Q9NRG7 319 aaPredicted RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 FAM120CQ9NX05 1096 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 NPFFR2Q9Y5X5 522 aa20.86■□□□□ 0.93
SKP1-206ENST00000519321 COPG1Q9Y678 874 aaKnown RBP20.86■□□□□ 0.93
SKP1-206ENST00000519321 KLRC4-KLRK1H3BQV0 150 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 TP53I11O14683 189 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 TO15178 435 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 CFLARO15519 480 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 ZNF354AO60765 605 aaPredicted RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 RASAL1O95294 804 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 C6orf47O95873 294 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 EFNA1P20827 205 aaPredicted RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 MRPL19P49406 292 aaKnown RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 NME5P56597 212 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 RPP38P78345 283 aaKnown RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 ZNF155Q12901 538 aaPredicted RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 INPP5JQ15735 1006 aaPredicted RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 ZNF791Q3KP31 576 aaPredicted RBP20.85■□□□□ 0.93
SKP1-206ENST00000519321 FAM174BQ3ZCQ3 159 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 LYPD8Q6UX82 237 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 TMEM64Q6YI46 380 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 PSD4Q8NDX1 1056 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 NUP43Q8NFH3 380 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 CPT1CQ8TCG5 803 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 NUDT8Q8WV74 236 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 MS4A4EQ96PG1 132 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 AGPAT4Q9NRZ5 378 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 DCTN4Q9UJW0 460 aa20.85■□□□□ 0.93
SKP1-206ENST00000519321 ABCD3P28288 659 aa20.84■□□□□ 0.93
SKP1-206ENST00000519321 NTRK2Q16620 822 aa20.84■□□□□ 0.93
SKP1-206ENST00000519321 VPS26BQ4G0F5 336 aa20.84■□□□□ 0.93
SKP1-206ENST00000519321 SPANXN4Q5MJ08 99 aa20.84■□□□□ 0.93
SKP1-206ENST00000519321 ZCCHC12Q6PEW1 402 aa20.84■□□□□ 0.93
SKP1-206ENST00000519321 BHLHB9Q6PI77 547 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms