RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS13B-207ENST00000518569 ATP8B3O60423 1300 aa2.93□□□□□ -1.94
VPS13B-207ENST00000518569 CEP170Q5SW79 1584 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 TDRD15B5MCY1 1934 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 LOC100653049A0A140TA62 436 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 LOC390937A0A1W2PQ73 354 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ERI2A8K979 691 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 SHISA9B4DS77 424 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 NEDD8-MDP1E9PL57 170 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GMFGO60234 142 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 PRDM1O75626 825 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 KRT34O76011 436 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 STBD1O95210 358 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 SERPINF2P08697 491 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 NUDT17P0C025 328 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 UBTFL6P0CB48 400 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 FCARP24071 287 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 LONP1P36776 959 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 HSD17B2P37059 387 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GSK3BP49841 420 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GBX2P52951 348 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 KCNK10P57789 538 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ACTR1AP61163 376 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 RPS27AP62979 156 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CDKL1Q00532 357 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GBE1Q04446 702 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 SLC17A1Q14916 467 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 HEPACAMQ14CZ8 416 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 MAJINQ3KP22 176 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 IFI44LQ53G44 452 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 FBXO48Q5FWF7 155 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 C12orf60Q5U649 245 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 AGAP7PQ5VUJ5 663 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CENPPQ6IPU0 288 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 EMBQ6PCB8 327 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 TAS2R42Q7RTR8 314 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 TIPARPQ7Z3E1 657 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 RABEPKQ7Z6M1 372 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 MARCH9Q86YJ5 346 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF781Q8N8C0 355 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 RTL3Q8N8U3 475 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 MRPL43Q8N983 215 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ACMSDQ8TDX5 336 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 RNF139Q8WU17 664 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 EEF2KMTQ96G04 330 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 PCED1BQ96HM7 432 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ATP6V1G3Q96LB4 118 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 C1orf147Q96MC9 270 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 RUFY1Q96T51 708 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 HSD17B14Q9BPX1 270 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 PUS3Q9BZE2 481 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CCSER1Q9C0I3 900 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GANQ9H2C0 597 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ADNPQ9H2P0 1102 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 EHD1Q9H4M9 534 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 PARVGQ9HBI0 331 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 SLC35D1Q9NTN3 355 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 ACOXLQ9NUZ1 547 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 GDAP2Q9NXN4 497 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 UBAP1Q9NZ09 502 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 PSME2Q9UL46 239 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 BARX2Q9UMQ3 279 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CLEC4AQ9UMR7 237 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 EXOC6BQ9Y2D4 811 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CHTOPQ9Y3Y2 248 aaKnown RBP2.92□□□□□ -1.94
VPS13B-207ENST00000518569 SALL1Q9NSC2 1324 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 CUL7Q14999 1698 aa2.92□□□□□ -1.94
VPS13B-207ENST00000518569 F8VZ95 297 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 NDUFS8O00217 210 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SLC28A1O00337 649 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ANGPT2O15123 496 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 BCL2L11O43521 198 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CSO75390 466 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 FGFR1OPO95684 399 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 TXNDC12O95881 172 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 IFNB1P01574 187 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CHRNGP07510 517 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SFTPBP07988 381 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 HCKP08631 526 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CCDC192P0DO97 292 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 GHRP10912 638 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 FOLR2P14207 255 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CCNA2P20248 432 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 S100A5P33763 92 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SPRP35270 261 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MAGEA4P43358 317 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 UCP2P55851 309 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 PEX3P56589 373 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MAP3K7CLP57077 242 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 RPL27P61353 136 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 BEX3Q00994 111 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ZFP36L1Q07352 338 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 C17orf67Q0P5P2 114 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 NPRL3Q12980 569 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MSLNQ13421 630 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 GK2Q14410 553 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CCL14Q16627 93 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MPPE1Q53F39 396 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 VWA2Q5GFL6 755 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SPINK14Q6IE38 97 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms