RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MANFP55145 182 aaKnown RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 CPTPQ5TA50 214 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SULF2Q8IWU5 870 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 NATD1Q8N6N6 113 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 CKAP2Q8WWK9 683 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 NR4A3Q92570 626 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 COQ8BQ96D53 544 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 HSPBAP1Q96EW2 488 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 LCORQ96JN0 433 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 MAELQ96JY0 434 aaKnown RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 VSTM2LQ96N03 204 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 BTBD9Q96Q07 612 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SLX1AQ9BQ83 275 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 WDR55Q9H6Y2 383 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SH2D2AQ9NP31 389 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SLCO1B3Q9NPD5 702 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 DDX18Q9NVP1 670 aaKnown RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 NPFFR2Q9Y5X5 522 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SPENQ96T58 3664 aaKnown RBP20.28■□□□□ 0.84
VEGFA-217ENST00000518538 SHANK1Q9Y566 2161 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 FRG2CA6NGY1 282 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 UPK1AO00322 258 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 ACOX3O15254 700 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 PEX1O43933 1283 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 LAMP1P11279 417 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 GPC1P35052 558 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 TMED10P49755 219 aaKnown RBP20.27■□□□□ 0.84
VEGFA-217ENST00000518538 MLC1Q15049 377 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 NNATQ16517 81 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 NTRK2Q16620 822 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 TMEM64Q6YI46 380 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 MAVSQ7Z434 540 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 SPATA19Q7Z5L4 167 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 CAMKMTQ7Z624 323 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 MAGEB18Q96M61 343 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 FOLH1BQ9HBA9 442 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 SACM1LQ9NTJ5 587 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 GPR55Q9Y2T6 319 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-217ENST00000518538 USH1CQ9Y6N9 552 aa20.27■□□□□ 0.84
VEGFA-217ENST00000518538 GOLGA8QA0A0J9YX86 632 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 GOLGA8OA6NCC3 632 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 GOLGA8NF8WBI6 632 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 ZNF195O14628 629 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 TO15178 435 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 ERN1O75460 977 aaKnown RBP20.26■□□□□ 0.83
VEGFA-217ENST00000518538 PSMG1O95456 288 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 ABCD3P28288 659 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 MEOX1P50221 254 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 GPR85P60893 370 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 SLC9B1Q4ZJI4 515 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 CPSF7Q8N684 471 aaKnown RBP20.26■□□□□ 0.83
VEGFA-217ENST00000518538 POGLUT1Q8NBL1 392 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 PAQR8Q8TEZ7 354 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 MAGED4Q96JG8 741 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 DPY30Q9C005 99 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 BHLHE41Q9C0J9 482 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-217ENST00000518538 DEPPQ9NTK1 212 aa20.26■□□□□ 0.83
VEGFA-217ENST00000518538 A0A1W2PRB8 838 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ANKRD28O15084 1053 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ATP8B1O43520 1251 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 NME6O75414 186 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CBX6O95503 412 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 P04436 131 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ALDOCP09972 364 aaKnown RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CCL3P10147 92 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 EDN3P14138 238 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 NAGAP17050 411 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 EFNA1P20827 205 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CNR1P21554 472 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CDK9P50750 372 aaKnown RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 TDGF1P3P51864 188 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 PSPHP78330 225 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ZNF155Q12901 538 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 RPS6KA2Q15349 733 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 HSP90B2PQ58FF3 399 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 SLC22A10Q63ZE4 541 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 RGS9BPQ6ZS82 235 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 PRR22Q8IZ63 422 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ZFP62Q8NB50 900 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ST6GALNAC3Q8NDV1 305 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 FAM13CQ8NE31 585 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 OR10G3Q8NGC4 313 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 ACTRT2Q8TDY3 377 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 NUDT8Q8WV74 236 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 DUSP26Q9BV47 211 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 MED4Q9NPJ6 270 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 AIG1Q9NVV5 245 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CNIH4Q9P003 139 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 NTMQ9P121 344 aa20.25■□□□□ 0.83
VEGFA-217ENST00000518538 CHCHD2Q9Y6H1 151 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-217ENST00000518538 TP53I11O14683 189 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 TGDSO95455 350 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 CT45A8P0DMV1 189 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 CT45A9P0DMV2 189 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 GNLYP22749 145 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 MST1P26927 711 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 UQCRFS1P47985 274 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 CORO7P57737 925 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 FBXW4P57775 412 aa20.24■□□□□ 0.83
VEGFA-217ENST00000518538 ALDH6A1Q02252 535 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms