RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CRYGNQ8WXF5 182 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 PHYHIPQ92561 330 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 CCDC51Q96ER9 411 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ZBED6CLQ96FA7 236 aaPredicted RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 C9orf85Q96MD7 179 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 KCNK16Q96T55 309 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 ERVK-6Q9BXR3 956 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 XPO4Q9C0E2 1151 aaKnown RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 SIRPDQ9H106 197 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 IL1RL2Q9HB29 575 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 NRN1Q9NPD7 142 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.031e-6■■□□□ 12.9
SKP1-203ENST00000517625 IMPAD1Q9NX62 359 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 IKZF3Q9UKT9 509 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 PLEKHA6Q9Y2H5 1048 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 MTF2Q9Y483 593 aaPredicted RBP2.36□□□□□ -2.03
SKP1-203ENST00000517625 SMAD5-AS1Q9Y6J3 95 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 UBE4BO95155 1302 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 GPRASP1Q5JY77 1395 aa2.36□□□□□ -2.03
SKP1-203ENST00000517625 A0A087WWV3 80 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TRBV7-9A0A0J9YWB2 115 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 A0A0U1RRA0 63 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 LRIT2A6NDA9 550 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF840PA6NDX5 716 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 FBLL1A6NHQ2 334 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 ERI2A8K979 691 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 E9PMD0 336 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 SGK494L7N484 410 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 RASGRF2O14827 1237 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TYROBPO43914 113 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 PRAMEF12O95522 483 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 HOXB7P09629 217 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 SLC35G4P0C7Q5 338 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ARF4P18085 180 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 SAA4P35542 130 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 SGSHP51688 502 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 YBEYP58557 167 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF85Q03923 595 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 PDIA5Q14554 519 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 PKN2Q16513 984 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF239Q16600 458 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 LRIT3Q3SXY7 679 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 PARP10Q53GL7 1025 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 LEG1Q6P5S2 330 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 CNSTQ6PJW8 725 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 REG3GQ6UW15 175 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TSEN54Q7Z6J9 526 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 AMZ2Q86W34 360 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF619Q8N2I2 560 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 GPD1LQ8N335 351 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 FAM71CQ8NEG0 241 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF397Q8NF99 534 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 OR56B1Q8NGI3 324 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TFB1MQ8WVM0 346 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 DLX4Q92988 240 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 LHX4Q969G2 390 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 PINX1Q96BK5 328 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 SPATA13Q96N96 652 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 DEFB118Q96PH6 123 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 NLNQ9BYT8 704 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TSPY26PQ9H489 355 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TMEM231Q9H6L2 316 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 RPAP3Q9H6T3 665 aaPredicted RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 POLD4Q9HCU8 107 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 CUTCQ9NTM9 273 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 ZNF446Q9NWS9 450 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 TAS2R16Q9NYV7 291 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 GALPQ9UBC7 116 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 FETUBQ9UGM5 382 aa2.35□□□□□ -2.03
SKP1-203ENST00000517625 HOOK1Q9UJC3 728 aaKnown RBP2.35□□□□□ -2.03
SKP1-203ENST00000517625 MFSD2BA6NFX1 497 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 H3BTX0 84 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PHF1O43189 567 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 RAMP1O60894 148 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 TOXO94900 526 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 MT-ATP6P00846 226 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 OAS1P00973 400 aaKnown RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 IGHV3-9P01782 118 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PIGRP01833 764 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PROS1P07225 676 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PVRP15151 417 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PTPN6P29350 595 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 FNTAP49354 379 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 METAP1P53582 386 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 NOP14P78316 857 aaKnown RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 RUNX3Q13761 415 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 BTG3Q14201 252 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 EIF2B1Q14232 305 aaKnown RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 ABRAXAS2Q15018 415 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PDK1Q15118 436 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PPP1R3AQ16821 1122 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 ZNF699Q32M78 642 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 CYBRD1Q53TN4 286 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 TCHHL1Q5QJ38 904 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 UTF1Q5T230 341 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 ELMOD2Q8IZ81 293 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 SLC22A18ASQ8N1D0 253 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms