RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TEX10Q9NXF1 929 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 IL17CQ9P0M4 197 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 KLHL21Q9UJP4 597 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 PLEKHA6Q9Y2H5 1048 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 DUXAA6NLW8 204 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 ARPC5O15511 151 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 CLIC3O95833 236 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 MT-ND1P03886 318 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 HGFP14210 728 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF25P17030 456 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC6A2P23975 617 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 CD6P30203 668 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 RORAP35398 523 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 TTPAP49638 278 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 DEFA5Q01523 94 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 ZP2Q05996 745 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 RPA4Q13156 261 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 MICAQ29983 383 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 LRRC26Q2I0M4 334 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 LRRC66Q68CR7 880 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 BLOC1S3Q6QNY0 202 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 DDIASQ8IXT1 998 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 MIER2Q8N344 545 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 SFRP1Q8N474 314 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 NKAPQ8N5F7 415 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 CANT1Q8WVQ1 401 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 KCNJ9Q92806 393 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 SFXN2Q96NB2 322 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 PRRX2Q99811 253 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 CPPED1Q9BRF8 314 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 FOLH1BQ9HBA9 442 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 AIG1Q9NVV5 245 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 DUS2Q9NX74 493 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 STUB1Q9UNE7 303 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 PCDHA9Q9Y5H5 950 aa7.09□□□□□ -1.27
PDLIM5-219ENST00000514743 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 AHRRA9YTQ3 701 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 RAF1P04049 648 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 IGFBP1P08833 259 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 THBS2P35442 1172 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PTGFRP43088 359 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 GPR143P51810 404 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PRSS12P56730 875 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TRA2BP62995 288 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 EGR3Q06889 387 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 IKZF1Q13422 519 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SERTAD2Q14140 314 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 RCAN2Q14206 197 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 FGFBP1Q14512 234 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TOMM34Q15785 309 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MEP1AQ16819 746 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PRAMEF13Q5VWM6 474 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ANKRD54Q6NXT1 300 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SPESP1Q6UW49 350 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SBSNQ6UWP8 590 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF783Q6ZMS7 281 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 Q6ZNB5 142 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ERN2Q76MJ5 926 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CCDC71Q8IV32 467 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 THAP3Q8WTV1 239 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC22A17Q8WUG5 538 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PIH1D2Q8WWB5 315 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 FKBP10Q96AY3 582 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TRMT61AQ96FX7 289 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CAPNS2Q96L46 248 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 DPCDQ9BVM2 203 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 POTEKPQ9BYX7 375 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MKLN1Q9UL63 735 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF451Q9Y4E5 1061 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 RNF215Q9Y6U7 377 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MYOFQ9NZM1 2061 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MPTX1A8MV57 137 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 LGALS8O00214 317 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 NRG2O14511 850 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ITGB1BP1O14713 200 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TBL1XO60907 577 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 VPS26AO75436 327 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 UGT2B17O75795 530 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SOD2P04179 222 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ALPIP09923 528 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 HSD17B1P14061 328 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 RABIFP47224 123 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CCL23P55773 120 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 KIAA1024LP59773 190 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC14A1Q13336 389 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MPPED2Q15777 294 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CTF1Q16619 201 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CDKN3Q16667 212 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 C18orf21Q32NC0 220 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ZRANB3Q5FWF4 1079 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 COQ5Q5HYK3 327 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CDC73Q6P1J9 531 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SPPL2CQ8IUH8 684 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM199Q8N511 208 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms