RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CCDC71Q8IV32 467 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ULK2Q8IYT8 1036 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ADCY4Q8NFM4 1077 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 OR52R1Q8NGF1 315 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 HGDQ93099 445 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ERP27Q96DN0 273 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TRIM44Q96DX7 344 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 HSPBAP1Q96EW2 488 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 C14orf79Q96F83 325 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TMEM41AQ96HV5 264 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 LCORQ96JN0 433 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 SHCBP1LQ9BZQ2 653 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 EXO5Q9H790 373 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 MID1IP1Q9NPA3 183 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 BCAP29Q9UHQ4 241 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 DLGAP4Q9Y2H0 992 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 C15orf41Q9Y2V0 281 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 PLLPQ9Y342 182 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TIMM22Q9Y584 194 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ZNF780BQ9Y6R6 833 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 A0A0G2JNJ9 132 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 GNG14A0A1W2PPG7 69 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 FRG2CA6NGY1 282 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 H3BQF6 201 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 TO15178 435 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 CDH16O75309 829 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 HOXD4P09016 255 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 GABRA1P14867 456 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 KRT15P19012 456 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 ADH7P40394 386 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 SLCO1A2P46721 670 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 TRPC1P48995 793 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 CDK9P50750 372 aaKnown RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 DNAJB13P59910 316 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 CRYZQ08257 329 aaKnown RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 PLCXD2Q0VAA5 305 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 HEPACAMQ14CZ8 416 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 RIPPLY2Q5TAB7 128 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 PACS2Q86VP3 889 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 SAMD14Q8IZD0 417 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 LIX1Q8N485 282 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 CCNYL1Q8N7R7 359 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 RDH11Q8TC12 318 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 EPS8L3Q8TE67 593 aaKnown RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 OMA1Q96E52 524 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 BTBD9Q96Q07 612 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 EBPLQ9BY08 206 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 UCK2Q9BZX2 261 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 KCNJ16Q9NPI9 418 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 EHD3Q9NZN3 535 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 PRODH2Q9UF12 536 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 Q9UFV3 132 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 EXPH5Q8NEV8 1989 aa9.57□□□□□ -0.88
HMGXB3-205ENST00000514469 MYO7BQ6PIF6 2116 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 C15orf38-AP3S2A0A0A6YYH1 394 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 FAM47E-STBD1D6RA91 191 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 BCAS2O75934 225 aaPredicted RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 RSL1D1O76021 490 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 ANXA4P09525 319 aaPredicted RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 DDCP20711 480 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 DRD5P21918 477 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 ELAVL4P26378 380 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PTPN6P29350 595 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 CRHR1P34998 444 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PTGDSP41222 190 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PPICP45877 212 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 ZFP36L2P47974 494 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 MASP1P48740 699 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 NAGLUP54802 743 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 ZNF763Q0D2J5 394 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 SNTA1Q13424 505 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 ACSF3Q4G176 576 aaPredicted RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 NHSL2Q5HYW2 709 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 TIGD3Q6B0B8 471 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 DESI1Q6ICB0 168 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 SCIMPQ6UWF3 145 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 NUP54Q7Z3B4 507 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 FAM9CQ8IZT9 166 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 OR10Q1Q8NGQ4 319 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 OR9A2Q8NGT5 310 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 VSTM2LQ96N03 204 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 GNRHR2Q96P88 292 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 NODALQ96S42 347 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 OSBPL11Q9BXB4 747 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PRDM14Q9GZV8 571 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 METTL7AQ9H8H3 244 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 TNFRSF12AQ9NP84 129 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 PFDN4Q9NQP4 134 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 SLC35C2Q9NQQ7 365 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
HMGXB3-205ENST00000514469 OXSMQ9NWU1 459 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms