RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 IL10RAQ13651 578 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PCOLCEQ15113 449 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 TRMT12Q53H54 448 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 JMJD6Q6NYC1 403 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SLC2A7Q6PXP3 512 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 RNF111Q6ZNA4 994 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 C6orf120Q7Z4R8 191 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 TREML1Q86YW5 311 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 OR2L13Q8N349 312 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 POU5F2Q8N7G0 328 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 NUP43Q8NFH3 380 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 OR52R1Q8NGF1 315 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 ADAMTS17Q8TE56 1095 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 EXTL1Q92935 676 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 NCLNQ969V3 563 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 DEFB126Q9BYW3 111 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 OR10A5Q9H207 317 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF160Q9HCG1 818 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MMP25Q9NPA2 562 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SLAMF7Q9NQ25 335 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SLC52A3Q9NQ40 469 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 ZCCHC3Q9NUD5 404 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 THUMPD1Q9NXG2 353 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MAT2BQ9NZL9 334 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 NTMQ9P121 344 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 TEKT2Q9UIF3 430 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PPIEQ9UNP9 301 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 ERVK-19Q9WJR5 959 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PCDHB14Q9Y5E9 798 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 RP1L1Q8IWN7 2480 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SPTBP11277 2137 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SEC16AO15027 2179 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 RNF103-CHMP3A0A140T963 221 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 C2orf92A0A1B0GVN3 265 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 A0A1W2PS29 197 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 TMEM247A6NEH6 219 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 UPK1AO00322 258 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 DDAH2O95865 285 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 AGR2O95994 175 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SERPINA7P05543 415 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 GSNP06396 782 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MATN1P21941 496 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 CDK9P50750 372 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MRPS35P82673 323 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 DUSP2Q05923 314 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ATP1A4Q13733 1029 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MYBPC3Q14896 1274 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 LTB4RQ15722 352 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 TRMT5Q32P41 509 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 PAGE3Q5JUK9 113 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 DCAF10Q5QP82 559 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 REP15Q6BDI9 236 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 FAM111BQ6SJ93 734 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 C16orf89Q6UX73 402 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ANGPTL8Q6UXH0 198 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 HACD2Q6Y1H2 254 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 DGAT2L6Q6ZPD8 337 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 CCDC121Q6ZUS5 278 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 DHDDSQ86SQ9 333 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 TAGAPQ8N103 731 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SLC5A8Q8N695 610 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 CDRT4Q8N9R6 151 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 NFAM1Q8NET5 270 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 OR7G2Q8NG99 324 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 OR8K3Q8NH51 312 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF721Q8TF20 911 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 LRRC58Q96CX6 371 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 FAM120BQ96EK7 910 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 IMMP1LQ96LU5 166 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MS4A4EQ96PG1 132 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 NPAS2Q99743 824 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 WDR77Q9BQA1 342 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SLC35A5Q9BS91 424 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 THUMPD3Q9BV44 507 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ACTRT3Q9BYD9 372 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 CXorf36Q9H7Y0 433 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 TPT1P8Q9HAU6 139 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 IL1RL2Q9HB29 575 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SERHLQ9NQF3 203 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF639Q9UID6 485 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MRTO4Q9UKD2 239 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 L3MBTL1Q9Y468 752 aa9.44□□□□□ -0.9
NEDD9-214ENST00000513989 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
NEDD9-214ENST00000513989 MED13Q9UHV7 2174 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 C15orf38-AP3S2A0A0A6YYH1 394 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 TRBV11-1A0A0K0K1C0 115 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 A8MUI8 341 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 B2RBV5 119 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 CLIC1O00299 241 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 FBP2O00757 339 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 CDK2AP1O14519 115 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 IGKV3-11P04433 115 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ITGB2P05107 769 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 ALOX5P09917 674 aa9.43□□□□□ -0.9
NEDD9-214ENST00000513989 CT62P0C5K7 136 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms