RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TYRP14679 529 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 BDKRB1P46663 353 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PER3P56645 1201 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 WNT3P56703 355 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 TAS2R50P59544 299 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 DSTNP60981 165 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 SF3A2Q15428 464 aaKnown RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 SLC5A12Q1EHB4 618 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 ASTLQ6HA08 431 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 HSD11B1LQ7Z5J1 315 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 WDR53Q7Z5U6 358 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 OR2A12Q8NGT7 310 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 IRF7Q92985 503 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 TTTY10Q9BZA0 68 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 TAS2R7Q9NYW3 318 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 C5AR2Q9P296 337 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
VCAN-210ENST00000513960 PLEKHB1Q9UF11 243 aaPredicted RBP9.13□□□□□ -0.95
VCAN-210ENST00000513960 TEX51A0A1B0GUA7 166 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 H0YC42 278 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 KLK1P06870 262 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PTGER1P34995 402 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 WNT4P56705 351 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PFN3P60673 137 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 CNTN1Q12860 1018 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 EXOSC2Q13868 293 aaKnown RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 ARHGAP15Q53QZ3 475 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 AGTRAPQ6RW13 159 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 SRFBP1Q8NEF9 429 aaKnown RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 PROKR2Q8NFJ6 384 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TEX47Q8TBZ9 253 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 MYLIPQ8WY64 445 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 YIPF4Q9BSR8 244 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 NDUFB11Q9NX14 153 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 LEFTY1O75610 366 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 IL32P24001 234 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PREPP48147 710 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 EPHA5P54756 1037 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 GLYR1Q49A26 553 aaPredicted RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 LAMTOR1Q6IAA8 161 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TEX261Q6UWH6 196 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 KLBQ86Z14 1044 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 NANOGP1Q8N7R0 232 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ARMC5Q96C12 935 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 AIFM2Q9BRQ8 373 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 SORBS1Q9BX66 1292 aaKnown RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 C1QTNF7Q9BXJ2 289 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 HCFC1R1Q9NWW0 138 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 U3KQ87 197 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ZAR1LA6NP61 321 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 M0R3H8 397 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PROM1O43490 865 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 UGDHO60701 494 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ATG13O75143 517 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 CCL5P13501 91 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 RHCEP18577 417 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ENPP1P22413 925 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 MANFP55145 182 aaKnown RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 MAZP56270 477 aaKnown RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 HSF2Q03933 536 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ZNF33BQ06732 778 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 GPR176Q14439 515 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 KANSL1Q7Z3B3 1105 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 C9orf62Q8N4C0 152 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TOMM5Q8N4H5 51 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TRAM1L1Q8N609 369 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 OR52I1Q8NGK6 324 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 GANCQ8TET4 914 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 CYB5D2Q8WUJ1 264 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 BTN2A2Q8WVV5 523 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TBC1D20Q96BZ9 403 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 LMLNQ96KR4 655 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 ZBP1Q9H171 429 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 TTYH1Q9H313 450 aaPredicted RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 DPAGT1Q9H3H5 408 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PIGUQ9H490 435 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 RANBP3Q9H6Z4 567 aaPredicted RBP9.12□□□□□ -0.95
VCAN-210ENST00000513960 TDP1Q9NUW8 608 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 MAB21L2Q9Y586 359 aa9.12□□□□□ -0.95
VCAN-210ENST00000513960 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 A0A0G2JN53 185 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ARHGEF33A8MVX0 844 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 HRO43593 1189 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 TSPAN6O43657 245 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 AKAP8O43823 692 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 PRAMEF4O60810 478 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 SLC43A1O75387 559 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ETHE1O95571 254 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 NR2F1P10589 423 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 GIFP27352 417 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CLDN20P56880 219 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 FABP5Q01469 135 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ZNF385BQ569K4 471 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 LY6G5CQ5SRR4 150 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 PRAMEF9Q5VWM5 478 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ARL9Q6T311 187 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms