RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ATAD3BQ5T9A4 648 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ZNF691Q5VV52 312 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 YOD1Q5VVQ6 348 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 BORAQ6PGQ7 559 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 TTC33Q6PID6 262 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 DHRS4L2Q6PKH6 230 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FAM92BQ6ZTR7 304 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 PRSS41Q7RTY9 318 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 RABEPKQ7Z6M1 372 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SLC35F3Q8IY50 421 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 D2HGDHQ8N465 521 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 LINC00471Q8N535 108 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 CDRT4Q8N9R6 151 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FAM181AQ8N9Y4 354 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 TTC29Q8NA56 475 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 SETD9Q8NE22 299 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 CHDHQ8NE62 594 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 TSPAN14Q8NG11 270 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 OR5D16Q8NGK9 328 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ADAMTS15Q8TE58 950 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 HDAC2Q92769 488 aaKnown RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 ZNF566Q969W8 418 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SLC35A4Q96G79 324 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 C16orf58Q96GQ5 468 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FBXL20Q96IG2 436 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SLC41A2Q96JW4 573 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ZNF578Q96N58 590 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 MUS81Q96NY9 551 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 COL21A1Q96P44 957 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 BARD1Q99728 777 aaKnown RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 PELOQ9BRX2 385 aaKnown RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 RSPO3Q9BXY4 272 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 GRIP2Q9C0E4 1043 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SAP130Q9H0E3 1048 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SLC38A1Q9H2H9 487 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 TRIM45Q9H8W5 580 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 POLE3Q9NRF9 147 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 DUSP22Q9NRW4 184 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 TMEM74BQ9NUR3 256 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 MAT2BQ9NZL9 334 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SEC14L3Q9UDX4 400 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ENOPH1Q9UHY7 261 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FBXO4Q9UKT5 387 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FAM32AQ9Y421 112 aaKnown RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 U3KQV3 271 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 UNC13CQ8NB66 2214 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 IGHV5-51A0A0C4DH38 117 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 SYNDIG1LA6NDD5 238 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 EIF4E1BA6NMX2 242 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 SGK494L7N484 410 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 LAMTOR5O43504 91 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 KIF1CO43896 1103 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 SDC3O75056 442 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 COQ9O75208 318 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 RDH16O75452 317 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 DIRAS1O95057 198 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 GADD45GO95257 159 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 CHRM4P08173 479 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 ALPPL2P10696 532 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 CD1CP29017 333 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 PRKAR1BP31321 381 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 OR1E2P47887 323 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 DHPSP49366 369 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 HLCSP50747 726 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 PRKAG1P54619 331 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 GFERP55789 205 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 HSD17B7P56937 341 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 GABARAPL2P60520 117 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 CXCR4P61073 352 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 OLR1P78380 273 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 HSD11B2P80365 405 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 TEKQ02763 1124 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 LTB4RQ15722 352 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 CLPPQ16740 277 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 ZIK1Q3SY52 487 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 PLK5Q496M5 336 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 COLEC12Q5KU26 742 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 TCTN3Q6NUS6 607 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 TSPYL5Q86VY4 417 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 MAML2Q8IZL2 1156 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 PARP8Q8N3A8 854 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 SMYD1Q8NB12 490 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 TMEM52Q8NDY8 209 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 OR10G2Q8NGC3 310 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 OR5T3Q8NGG3 340 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 OR9A4Q8NGU2 314 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 NCSTNQ92542 709 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 KAT2AQ92830 837 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 AHCYL2Q96HN2 611 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 TGM7Q96PF1 710 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 ARHGDIGQ99819 225 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 DPYSL5Q9BPU6 564 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 FUZQ9BT04 418 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 POLR2J2Q9GZM3 115 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 POLR2J3Q9H1A7 115 aaKnown RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 MTHFD2LQ9H903 347 aaPredicted RBP7.83□□□□□ -1.16
RNF4-220ENST00000513578 KRT84Q9NSB2 600 aa7.83□□□□□ -1.16
RNF4-220ENST00000513578 STARD5Q9NSY2 213 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms