RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SNRNP35Q16560 246 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 MEP1BQ16820 701 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 KNOP1Q1ED39 458 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 GPR33Q49SQ1 333 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 IFI44LQ53G44 452 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 CENPPQ6IPU0 288 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MEX3BQ6ZN04 569 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 CBWD2Q8IUF1 395 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 KLHDC8BQ8IXV7 354 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 GPR65Q8IYL9 337 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 ZNF843Q8N446 348 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 LRTM2Q8N967 370 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 ADAD2Q8NCV1 583 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 STKLD1Q8NE28 680 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 OR5B17Q8NGF7 314 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 APOBEC4Q8WW27 367 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 ZNRF4Q8WWF5 429 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 FGF14Q92915 247 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 AP2M1Q96CW1 435 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 EEF2KMTQ96G04 330 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 CFAP36Q96G28 342 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 TSG101Q99816 390 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 ATG101Q9BSB4 218 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 PLA2G2FQ9BZM2 168 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 UBQLN3Q9H347 655 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MAGEF1Q9HAY2 307 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 B3GAT2Q9NPZ5 323 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 SPHK2Q9NRA0 654 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MAN2C1Q9NTJ4 1040 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 DNAJC17Q9NVM6 304 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 SLCO1C1Q9NYB5 712 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 KLHL8Q9P2G9 620 aaPredicted RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 LNPEPQ9UIQ6 1025 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 NOCTQ9UK39 431 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 PCDHGA1Q9Y5H4 931 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 STYXL1Q9Y6J8 313 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MICAL3Q7RTP6 2002 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 MYBPHLA2RUH7 354 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 A4D1N5 150 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 MTMR11A4FU01 709 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 FAM149AA5PLN7 773 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 CETN3O15182 167 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 HCRTO43612 131 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 KINO60870 393 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 FGF19O95750 216 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PAK4O96013 591 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 IGHEP01854 428 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SBK2P0C263 348 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 P4HA1P13674 534 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 GNB3P16520 340 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 FERP16591 822 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 GOT1P17174 413 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 LMO2P25791 158 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ADORA2BP29275 332 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ANP32AP39687 249 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 MMP12P39900 470 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 FRKP42685 505 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 CASP4P49662 377 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ATP12AP54707 1039 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SNRPFP62306 86 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 CSTF1Q05048 431 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 SLC34A1Q06495 639 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 CYP24A1Q07973 514 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PNOCQ13519 176 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 EFTUD2Q15029 972 aaKnown RBP eCLIP3.68□□□□□ -1.82
HTT-210ENST00000512909 CAMK4Q16566 473 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 TPD52L1Q16890 204 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 ZNF674Q2M3X9 581 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 CCDC40Q4G0X9 1142 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ZNF789Q5FWF6 425 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 FAM78AQ5JUQ0 283 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ATP1A1-AS1Q5TC04 95 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SLC8B1Q6J4K2 584 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 KLHL10Q6JEL2 608 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 BTNL8Q6UX41 500 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SCARA5Q6ZMJ2 495 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 Q6ZTC4 211 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PIWIL3Q7Z3Z3 882 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 GPR141Q7Z602 305 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 EFCAB13Q8IY85 973 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 APCDD1Q8J025 514 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 TMEM86AQ8N2M4 240 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 PDCL2Q8N4E4 241 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SMYD1Q8NB12 490 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SPC24Q8NBT2 197 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 OR10T2Q8NGX3 314 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 OLIG1Q8TAK6 271 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 GOLGA5Q8TBA6 731 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SPPL2BQ8TCT7 592 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 SCFD1Q8WVM8 642 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 MRPS31Q92665 395 aaKnown RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 ZNF486Q96H40 463 aaPredicted RBP3.68□□□□□ -1.82
HTT-210ENST00000512909 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ART5Q96L15 291 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 C10orf90Q96M02 699 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 CYP2S1Q96SQ9 504 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 ACBD6Q9BR61 282 aa3.68□□□□□ -1.82
HTT-210ENST00000512909 MRPL45Q9BRJ2 306 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms