RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FNDC7Q5VTL7 733 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 ENPP6Q6UWR7 440 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 OR1J4Q8NGS1 313 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 UGT2B28Q9BY64 529 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 EPB41L4BQ9H329 900 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 PIGMQ9H3S5 423 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 XPR1Q9UBH6 696 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 PRODH2Q9UF12 536 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 EXO1Q9UQ84 846 aaKnown RBP11.48□□□□□ -0.57
VEGFA-216ENST00000512683 CAMK2AQ9UQM7 478 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 PLEKHA6Q9Y2H5 1048 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 A0A087WUV0 522 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 A0A1B0GTL3 188 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 C1orf226A1L170 272 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 GLOD5A6NK44 160 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ABCB7O75027 752 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ERN1O75460 977 aaKnown RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 PPM1BO75688 479 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 BCAS2O75934 225 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 RCBTB2O95199 551 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ATP1B1P05026 303 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 CYP4B1P13584 511 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 S1PR1P21453 382 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 DRD5P21918 477 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 CNTFP26441 200 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ABCD3P28288 659 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 PTPN6P29350 595 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 SSTR4P31391 388 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 FOXD4Q12950 439 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 FBXW10Q5XX13 1052 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 FRG2Q64ET8 278 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 RPS27LQ71UM5 84 aaKnown RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 SMPDL3BQ92485 455 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 WNT2BQ93097 391 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 UCN3Q969E3 161 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ERP27Q96DN0 273 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 LCORQ96JN0 433 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 FRG2BQ96QU4 278 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 TRIB1Q96RU8 372 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 LIME1Q9H400 295 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 METTL7AQ9H8H3 244 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 PLEKHF2Q9H8W4 249 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 BEX4Q9NWD9 120 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 TEX10Q9NXF1 929 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-216ENST00000512683 NFU1Q9UMS0 254 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 PCDHA9Q9Y5H5 950 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 ACANP16112 2415 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 HCFC1P51610 2035 aa11.47□□□□□ -0.57
VEGFA-216ENST00000512683 PPP6CO00743 305 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 SNPHO15079 494 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TO15178 435 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 DIAPH2O60879 1101 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 ATE1O95260 518 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 GBAP04062 536 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CRHP06850 196 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 KLK1P06870 262 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 RPS17P08708 135 aaKnown RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CSNK2A2P19784 350 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 NT5EP21589 574 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TACR1P25103 407 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 HOXC12P31275 282 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 PPICP45877 212 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CCNG1P51959 295 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 DIO3P55073 304 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 IFT88Q13099 833 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TOMM20Q15388 145 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 BCL2A1Q16548 175 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 GGTA1PQ4G0N0 100 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CCNYL2Q5T2Q4 361 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 FAM219BQ5XKK7 198 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 AAGABQ6PD74 315 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TAOK1Q7L7X3 1001 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 SAMD14Q8IZD0 417 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 VWA5B2Q8N398 1253 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 METTL4Q8N3J2 472 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 GBP7Q8N8V2 638 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 DOK4Q8TEW6 326 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 TMCO6Q96DC7 493 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 MRPL57Q9BQC6 102 aaKnown RBP11.46□□□□□ -0.57
VEGFA-216ENST00000512683 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF639Q9UID6 485 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 CES1P1Q9UKY3 287 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.57
VEGFA-216ENST00000512683 A0A1W2PS29 197 aa11.45□□□□□ -0.58
VEGFA-216ENST00000512683 CLCA1A8K7I4 914 aa11.45□□□□□ -0.58
VEGFA-216ENST00000512683 A8MT66 165 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms