RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZG16BQ96DA0 208 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF333Q96JL9 665 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GLT1D1Q96MS3 346 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 VPS35Q96QK1 796 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF587Q96SQ5 575 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 APOL2Q9BQE5 337 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 TRMT61BQ9BVS5 477 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GPR174Q9BXC1 333 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 LHX5Q9H2C1 402 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MRPS30Q9NP92 439 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 SAE1Q9UBE0 346 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 RBM8AQ9Y5S9 174 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 NPTNQ9Y639 398 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 THSD7AQ9UPZ6 1657 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 A0A1B0GUS0 222 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 FITM1A5D6W6 292 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 MEGF11A6BM72 1044 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ELOA3DA6NLF2 546 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NPIPA7E9PJI5 369 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 STC2O76061 302 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 MT-CYBP00156 380 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SP9P0CG40 484 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NPIPA8P0DM63 369 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 GOT1P17174 413 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 GNA11P29992 359 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 KCNQ1P51787 676 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 IRX4P78413 519 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ELOA3BQ3SY89 546 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 LINC01620Q4KN68 170 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 AARS2Q5JTZ9 985 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 IL23RQ5VWK5 629 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 FAM166AQ6J272 317 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 MPZL3Q6UWV2 235 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM107Q6UX40 140 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 RNF111Q6ZNA4 994 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CLEC14AQ86T13 490 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 KCNMB4Q86W47 210 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZFAND4Q86XD8 727 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CBWD2Q8IUF1 395 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CSNK1A1LQ8N752 337 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ELOA3Q8NG57 546 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 PIWIL2Q8TC59 973 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 RAET1EQ8TD07 263 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 DNAJB3Q8WWF6 145 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR2B2Q9GZK3 357 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NEUROG2Q9H2A3 272 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 RHOJQ9H4E5 214 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CATSPERBQ9H7T0 1116 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 STEAP1Q9UHE8 339 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NARFQ9UHQ1 456 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZNHIT2Q9UHR6 403 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 MTMR11A4FU01 709 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 TEX33O43247 280 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NFATC1O95644 943 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 HMGN1P05114 100 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CSN3P07498 182 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NDUFS1P28331 727 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC1A4P43007 532 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 DGKQP52824 942 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ART1P52961 327 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ATP6V0D1P61421 351 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 HERVK_113P63132 956 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ERVK-25P63136 954 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC34A1Q06495 639 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 EGR3Q06889 387 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 CR1LQ2VPA4 569 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SOWAHCQ53LP3 525 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 C6orf10Q5SRN2 563 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 RPTNQ6XPR3 784 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ETV3LQ6ZN32 361 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC26A9Q7LBE3 791 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 GABRG1Q8N1C3 465 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR51G2Q8NGK0 314 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 VANGL1Q8TAA9 524 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 NUBPLQ8TB37 319 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 UBTD2Q8WUN7 234 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 SYTL4Q96C24 671 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 KLHDC3Q9BQ90 382 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 PTDSS2Q9BVG9 487 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ERVK-6Q9BXR3 956 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 LPAR2Q9HBW0 351 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ABCD2Q9UBJ2 740 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 APOBEC3BQ9UH17 382 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZMYM6O95789 1325 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 AFF2P51816 1311 aa5.83□□□□□ -1.48
TRAPPC11-209ENST00000512476 IBTKQ9P2D0 1353 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 ATRNO75882 1429 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 CENPBD1B2RD01 187 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 EEF2KO00418 725 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 SPRY2O43597 315 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 LCMT2O60294 686 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 RAD51DO75771 328 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 ARHGEF15O94989 841 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 RPP14O95059 124 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 GYPEP15421 78 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 BDKRB2P30411 391 aa5.82□□□□□ -1.48
TRAPPC11-209ENST00000512476 CDH5P33151 784 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms