RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NME5P56597 212 aa8.8□□□□□ -1
SNF8-211ENST00000512243 CLDN8P56748 225 aa8.8□□□□□ -1
SNF8-211ENST00000512243 OR4D2P58180 307 aa8.8□□□□□ -1
SNF8-211ENST00000512243 C21orf58P58505 322 aa8.8□□□□□ -1
SNF8-211ENST00000512243 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
SNF8-211ENST00000512243 CDC20Q12834 499 aa8.8□□□□□ -1
SNF8-211ENST00000512243 BIKQ13323 160 aa8.8□□□□□ -1
SNF8-211ENST00000512243 SQLEQ14534 574 aa8.8□□□□□ -1
SNF8-211ENST00000512243 UGT8Q16880 541 aa8.8□□□□□ -1
SNF8-211ENST00000512243 TMEM205Q6UW68 189 aa8.8□□□□□ -1
SNF8-211ENST00000512243 LANCL3Q6ZV70 420 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ANKRD37Q7Z713 158 aa8.8□□□□□ -1
SNF8-211ENST00000512243 MRGPREQ86SM8 312 aa8.8□□□□□ -1
SNF8-211ENST00000512243 TICAM1Q8IUC6 712 aa8.8□□□□□ -1
SNF8-211ENST00000512243 OR4N5Q8IXE1 308 aa8.8□□□□□ -1
SNF8-211ENST00000512243 MIER2Q8N344 545 aa8.8□□□□□ -1
SNF8-211ENST00000512243 KRTCAP2Q8N6L1 136 aa8.8□□□□□ -1
SNF8-211ENST00000512243 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.8□□□□□ -1
SNF8-211ENST00000512243 ANKRD9Q96BM1 317 aaPredicted RBP8.8□□□□□ -1
SNF8-211ENST00000512243 PPCDCQ96CD2 204 aa8.8□□□□□ -1
SNF8-211ENST00000512243 MTERF3Q96E29 417 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ZNF764Q96H86 408 aaPredicted RBP8.8□□□□□ -1
SNF8-211ENST00000512243 BBS4Q96RK4 519 aa8.8□□□□□ -1
SNF8-211ENST00000512243 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
SNF8-211ENST00000512243 ALOXE3Q9BYJ1 711 aa8.8□□□□□ -1
SNF8-211ENST00000512243 RABEP2Q9H5N1 569 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ADAP2Q9NPF8 381 aa8.8□□□□□ -1
SNF8-211ENST00000512243 PNO1Q9NRX1 252 aaKnown RBP8.8□□□□□ -1
SNF8-211ENST00000512243 MRGBPQ9NV56 204 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ATAD3AQ9NVI7 634 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ZIM2Q9NZV7 527 aa8.8□□□□□ -1
SNF8-211ENST00000512243 SH3BP4Q9P0V3 963 aa8.8□□□□□ -1
SNF8-211ENST00000512243 ATP6V1HQ9UI12 483 aa8.8□□□□□ -1
SNF8-211ENST00000512243 CES1P1Q9UKY3 287 aa8.8□□□□□ -1
SNF8-211ENST00000512243 GPR45Q9Y5Y3 372 aa8.8□□□□□ -1
SNF8-211ENST00000512243 HS3ST3B1Q9Y662 390 aa8.8□□□□□ -1
SNF8-211ENST00000512243 CFAP47Q6ZTR5 3102 aa8.79□□□□□ -1
SNF8-211ENST00000512243 PEX12O00623 359 aa8.79□□□□□ -1
SNF8-211ENST00000512243 SOCS6O14544 535 aa8.79□□□□□ -1
SNF8-211ENST00000512243 SNX3O60493 162 aa8.79□□□□□ -1
SNF8-211ENST00000512243 TBX19O60806 448 aa8.79□□□□□ -1
SNF8-211ENST00000512243 CPMP14384 443 aa8.79□□□□□ -1
SNF8-211ENST00000512243 PORP16435 677 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 PRKCAP17252 672 aa8.79□□□□□ -1
SNF8-211ENST00000512243 WT1P19544 449 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 ENDOUP21128 410 aaKnown RBP8.79□□□□□ -1
SNF8-211ENST00000512243 STT3AP46977 705 aa8.79□□□□□ -1
SNF8-211ENST00000512243 MRPL19P49406 292 aaKnown RBP8.79□□□□□ -1
SNF8-211ENST00000512243 XKP51811 444 aa8.79□□□□□ -1
SNF8-211ENST00000512243 TMPRSS3P57727 454 aa8.79□□□□□ -1
SNF8-211ENST00000512243 IGLV3-21P80748 117 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 TLE3Q04726 772 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ATP1A4Q13733 1029 aa8.79□□□□□ -1
SNF8-211ENST00000512243 PDE7AQ13946 482 aa8.79□□□□□ -1
SNF8-211ENST00000512243 DPY19L1Q2PZI1 675 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ZNF385BQ569K4 471 aa8.79□□□□□ -1
SNF8-211ENST00000512243 SFT2D3Q587I9 215 aa8.79□□□□□ -1
SNF8-211ENST00000512243 CPTPQ5TA50 214 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ANKRD26P1Q6NSI1 321 aa8.79□□□□□ -1
SNF8-211ENST00000512243 PAPD4Q6PIY7 484 aaKnown RBP8.79□□□□□ -1
SNF8-211ENST00000512243 CPEB2Q7Z5Q1 589 aaKnown RBP8.79□□□□□ -1
SNF8-211ENST00000512243 PPP1R32Q7Z5V6 425 aa8.79□□□□□ -1
SNF8-211ENST00000512243 TMEM151BQ8IW70 566 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ST13P4Q8IZP2 240 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 LRRC25Q8N386 305 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 GLB1L3Q8NCI6 653 aaPredicted RBP8.79□□□□□ -1
SNF8-211ENST00000512243 NUP43Q8NFH3 380 aa8.79□□□□□ -1
SNF8-211ENST00000512243 OR7A2PQ8NGA2 310 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ZFP28Q8NHY6 868 aa8.79□□□□□ -1
SNF8-211ENST00000512243 UCN3Q969E3 161 aa8.79□□□□□ -1
SNF8-211ENST00000512243 NACC2Q96BF6 587 aa8.79□□□□□ -1
SNF8-211ENST00000512243 C8orf44Q96CB5 159 aa8.79□□□□□ -1
SNF8-211ENST00000512243 JMJD8Q96S16 334 aa8.79□□□□□ -1
SNF8-211ENST00000512243 CLMPQ9H6B4 373 aa8.79□□□□□ -1
SNF8-211ENST00000512243 SLC35C2Q9NQQ7 365 aa8.79□□□□□ -1
SNF8-211ENST00000512243 FBXL4Q9UKA2 621 aa8.79□□□□□ -1
SNF8-211ENST00000512243 POLHQ9Y253 713 aa8.79□□□□□ -1
SNF8-211ENST00000512243 ZNF451Q9Y4E5 1061 aa8.79□□□□□ -1
SNF8-211ENST00000512243 COPG1Q9Y678 874 aaKnown RBP8.79□□□□□ -1
SNF8-211ENST00000512243 LAMA5O15230 3695 aa8.78□□□□□ -1
SNF8-211ENST00000512243 A0A087WV48 116 aa8.78□□□□□ -1
SNF8-211ENST00000512243 LOC102723996A0A087X1L8 192 aa8.78□□□□□ -1
SNF8-211ENST00000512243 IGHV1-45A0A0A0MS14 117 aa8.78□□□□□ -1
SNF8-211ENST00000512243 NSG1A0A0A6YYJ2 146 aa8.78□□□□□ -1
SNF8-211ENST00000512243 SAGE2PA6NJ88 616 aa8.78□□□□□ -1
SNF8-211ENST00000512243 WASHC1A8K0Z3 465 aa8.78□□□□□ -1
SNF8-211ENST00000512243 A8MUA0 341 aa8.78□□□□□ -1
SNF8-211ENST00000512243 ANKRD28O15084 1053 aa8.78□□□□□ -1
SNF8-211ENST00000512243 NKX2-8O15522 239 aa8.78□□□□□ -1
SNF8-211ENST00000512243 SLC22A3O75751 556 aa8.78□□□□□ -1
SNF8-211ENST00000512243 SEC24DO94855 1032 aaPredicted RBP8.78□□□□□ -1
SNF8-211ENST00000512243 FAM107AO95990 144 aa8.78□□□□□ -1
SNF8-211ENST00000512243 HPP00738 406 aa8.78□□□□□ -1
SNF8-211ENST00000512243 SLC35E2P0CK97 266 aa8.78□□□□□ -1
SNF8-211ENST00000512243 COX6A1P12074 109 aa8.78□□□□□ -1
SNF8-211ENST00000512243 CSNK2A2P19784 350 aaPredicted RBP8.78□□□□□ -1
SNF8-211ENST00000512243 NT5EP21589 574 aa8.78□□□□□ -1
SNF8-211ENST00000512243 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
SNF8-211ENST00000512243 NCBP2P52298 156 aaKnown RBP eCLIP8.78□□□□□ -11e-9■■□□□ 12.9
SNF8-211ENST00000512243 UFM1P61960 85 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms