RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 C12orf65Q9H3J6 166 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 EML4Q9HC35 981 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 INTS10Q9NVR2 710 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 FETUBQ9UGM5 382 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 MTO1Q9Y2Z2 717 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 ELOA3DA6NLF2 546 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 E5RI56 91 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 HCRTR2O43614 444 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TCF21O43680 179 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SERPINA6P08185 405 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 NUDT17P0C025 328 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SAT1P21673 171 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SERPINB3P29508 390 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 GMPRP36959 345 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 KCNJ5P48544 419 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 LHX2P50458 406 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 LIM2P55344 173 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 FUT7Q11130 342 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ELOA3BQ3SY89 546 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 PRR31Q5SQ13 230 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 GALNT7Q86SF2 657 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ZC3HC1Q86WB0 502 aaKnown RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 TRIM42Q8IWZ5 723 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 CPNE9Q8IYJ1 553 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ELOA3Q8NG57 546 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 SPPL2AQ8TCT8 520 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 CDKL2Q92772 493 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 NEIL2Q969S2 332 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TSNARE1Q96NA8 513 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 ZIM3Q96PE6 472 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 PAFAH2Q99487 392 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 NDNQ99608 321 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 RBBP8Q99708 897 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 NPLQ9BXD5 320 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 MANSC1Q9H8J5 431 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 TEX10Q9NXF1 929 aaPredicted RBP8.22□□□□□ -1.09
NUP54-211ENST00000512151 CTNNAL1Q9UBT7 734 aa8.22□□□□□ -1.09
NUP54-211ENST00000512151 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.09
NUP54-211ENST00000512151 RYR3Q15413 4870 aa8.21□□□□□ -1.09
NUP54-211ENST00000512151 EXPH5Q8NEV8 1989 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 URADA6NGE7 173 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 VENTXO95231 258 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 TBX6O95947 436 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 CRHP06850 196 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 PTNP21246 168 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 CERS1P27544 350 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 GP5P40197 560 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 MSH2P43246 934 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 MASP1P48740 699 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 COMPP49747 757 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 CDKN2DP55273 166 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 GFRA1P56159 465 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 CLDN18P56856 261 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 STX4Q12846 297 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 NAB1Q13506 487 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 SQLEQ14534 574 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 RBBP5Q15291 538 aaKnown RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 GRTP1Q5TC63 336 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 TIGD3Q6B0B8 471 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 ATG4DQ86TL0 474 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 RFLNBQ8N5W9 214 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 TRPV3Q8NET8 790 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 CD200R1Q8TD46 325 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 EPS8L3Q8TE67 593 aaKnown RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 FIG4Q92562 907 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 HTRA1Q92743 480 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 FBXW5Q969U6 566 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 MS4A6EQ96DS6 147 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 ZNF845Q96IR2 970 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 GPR21Q99679 349 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 CPNE1Q99829 537 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 HAUS8Q9BT25 410 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 TRAF4Q9BUZ4 470 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 NSMCE4AQ9NXX6 385 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.1
NUP54-211ENST00000512151 COPS7AQ9UBW8 275 aa8.21□□□□□ -1.1
NUP54-211ENST00000512151 EXOC1LA0A1B0GW35 172 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 CLOCKO15516 846 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
NUP54-211ENST00000512151 B3GALT2O43825 422 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 SNX4O95219 450 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 CLPSP04118 112 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 ENO3P13929 434 aaPredicted RBP8.2□□□□□ -1.1
NUP54-211ENST00000512151 CCND1P24385 295 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 CHMP24386 653 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 CASP3P42574 277 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 TAS2R39P59534 338 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 ZNF844Q08AG5 666 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 EXOC3L2Q2M3D2 409 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 TTLL9Q3SXZ7 439 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 UGT3A1Q6NUS8 523 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 STAC2Q6ZMT1 411 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 OR4N5Q8IXE1 308 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 KLHDC8AQ8IYD2 350 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 DND1Q8IYX4 353 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms