RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 TARDBPQ13148 414 aaKnown RBP eCLIP8.89□□□□□ -0.99
SUB1-209ENST00000511615 GAS6Q14393 721 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 OXA1LQ15070 435 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 GPAT3Q53EU6 434 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 SLC48A1Q6P1K1 146 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 WASH2PQ6VEQ5 465 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 ZNF793Q6ZN11 406 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 LACC1Q8IV20 430 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 AMER3Q8N944 861 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 TMEM145Q8NBT3 493 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 OR8K5Q8NH50 307 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 GNPDA2Q8TDQ7 276 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 LCN9Q8WX39 176 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 PRRC1Q96M27 445 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 MGLLQ99685 303 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 PRRG3Q9BZD7 231 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 SERHL2Q9H4I8 314 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 KLHL31Q9H511 634 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 SLC25A19Q9HC21 320 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 C11orf16Q9NQ32 467 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 KLHL28Q9NXS3 571 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 USP36Q9P275 1121 aaKnown RBP8.89□□□□□ -0.99
SUB1-209ENST00000511615 FBXW2Q9UKT8 454 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 PCM1Q15154 2024 aa8.89□□□□□ -0.99
SUB1-209ENST00000511615 LOC100506127A0A0U1RQW1 187 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 A0A1W2PR48 441 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 URADA6NGE7 173 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 DUXAA6NLW8 204 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 FAM170BA6NMN3 283 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 AXIN1O15169 862 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ENTPD6O75354 484 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 MED26O95402 600 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 AIFM1O95831 613 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PTHP01270 115 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 FUCA1P04066 466 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ALPPP05187 535 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 DBTP11182 482 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 ACADMP11310 421 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 F3P13726 295 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 GABRG2P18507 467 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 BUD31P41223 144 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 SLC15A1P46059 708 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ADPRHP54922 357 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 FOXD4Q12950 439 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 KRR1Q13601 381 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 C1DQ13901 141 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 SEC23BQ15437 767 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 MED22Q15528 200 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ZNF181Q2M3W8 571 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 KLHL22Q53GT1 634 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 TJAP1Q5JTD0 557 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 SLC25A30Q5SVS4 291 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ZNF425Q6IV72 752 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PODNL1Q6PEZ8 512 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 AMIGO1Q86WK6 493 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 CCDC116Q8IYX3 515 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 NUP43Q8NFH3 380 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 NT5CQ8TCD5 201 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 GAL3ST3Q96A11 431 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ITPKCQ96DU7 683 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 NRTNQ99748 197 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 FUZQ9BT04 418 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 IER2Q9BTL4 223 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 MND1Q9BWT6 205 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 TEX12Q9BXU0 123 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 POLDIP3Q9BY77 421 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 NXF2Q9GZY0 626 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 ANKRD19PQ9H560 264 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 SIAEQ9HAT2 523 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 POLMQ9NP87 494 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 PRDM8Q9NQV8 689 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 CRNNQ9UBG3 495 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 A4GNTQ9UNA3 340 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 CFL2Q9Y281 166 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PLEKHM1Q9Y4G2 1056 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 SNX11Q9Y5W9 270 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PMF1-BGLAPU3KQ54 211 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PRSS38A1L453 326 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 OR52A4PA6NMU1 304 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PROM1O43490 865 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 APBB3O95704 486 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 HMGN2P05204 90 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 CHRM5P08912 532 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 NDUFV2P19404 249 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 ZNF10P21506 573 aaPredicted RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 CD97P48960 835 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PCYT1AP49585 367 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 TPMTP51580 245 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 SMSP52788 366 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PRKCDQ05655 676 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 HYAL2Q12891 473 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 LASP1Q14847 261 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 KIR2DS3Q14952 304 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 TRAM2Q15035 370 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 TSTQ16762 297 aaKnown RBP8.88□□□□□ -0.99
SUB1-209ENST00000511615 ZNF311Q5JNZ3 666 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
SUB1-209ENST00000511615 MFSD4BQ5TF39 518 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms