RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 PPP1R3BQ86XI6 285 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 OR7G1Q8NGA0 311 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 PROX1Q92786 737 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 TPD52L3Q96J77 140 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 OR6C1Q96RD1 312 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 SYNDIG1Q9H7V2 258 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 EVA1AQ9H8M9 152 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 CACYBPQ9HB71 228 aaKnown RBP14.21□□□□□ -0.13
SCLT1-209ENST00000511426 C11orf16Q9NQ32 467 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 SEC14L3Q9UDX4 400 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 PCDHGA8Q9Y5G5 932 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 CLDN16Q9Y5I7 305 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 NCOR1O75376 2440 aa14.21□□□□□ -0.14
SCLT1-209ENST00000511426 CABIN1Q9Y6J0 2220 aa14.21□□□□□ -0.14
SCLT1-209ENST00000511426 IGKV3D-11A0A0A0MRZ8 115 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 FAM149AA5PLN7 773 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TMEM229AB2RXF0 380 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 G3V2T6 193 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TMX2-CTNND1H3BSU7 103 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SYT5O00445 386 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CCKBRP32239 447 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SOX18P35713 384 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 KCNJ5P48544 419 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 VLDLRP98155 873 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ID2Q02363 134 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 FUT7Q11130 342 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ZNHIT3Q15649 155 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SYPL1Q16563 259 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TRMT12Q53H54 448 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TCEAL6Q6IPX3 200 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SHQ1Q6PI26 577 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 VTCN1Q7Z7D3 282 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CBR4Q8N4T8 237 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SPPL2AQ8TCT8 520 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TCEAL3Q969E4 200 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 TMBIM1Q969X1 311 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ART5Q96L15 291 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF354BQ96LW1 612 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CDC6Q99741 560 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 LMF2Q9BU23 707 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 EQTNQ9NQ60 294 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 USE1Q9NZ43 259 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 AKAP7Q9P0M2 348 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 DHCR7Q9UBM7 475 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CFL2Q9Y281 166 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 IFT52Q9Y366 437 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 NUP214P35658 2090 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ADAMTS9Q9P2N4 1935 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SAC3D1A6NKF1 404 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 DENRO43583 198 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 DNAJB5O75953 348 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 NKX2-2O95096 273 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CBX7O95931 251 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 IFNW1P05000 195 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 CD247P20963 164 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 DNAJA1P31689 397 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 E2F1Q01094 437 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 FUT5Q11128 374 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 MED21Q13503 144 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SYT16Q17RD7 645 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 RFX4Q33E94 735 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 IQCCQ4KMZ1 466 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 GPAT3Q53EU6 434 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 PHF19Q5T6S3 580 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 OIT3Q8WWZ8 545 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 NR4A3Q92570 626 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 COL21A1Q96P44 957 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 EPYCQ99645 322 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 RBM4BQ9BQ04 359 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 RBM4Q9BWF3 364 aaKnown RBP14.2□□□□□ -0.14
SCLT1-209ENST00000511426 GABARAPL1Q9H0R8 117 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 IRF2BPLQ9H1B7 796 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 SMOC1Q9H4F8 434 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 REEP1Q9H902 201 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 ADAP2Q9NPF8 381 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 PRODH2Q9UF12 536 aa14.2□□□□□ -0.14
SCLT1-209ENST00000511426 PRAMEF27A3QJZ7 478 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SOCS2O14508 198 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 E2F6O75461 281 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SCRG1O75711 98 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 MT-ND1P03886 318 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 FESP07332 822 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 RHCEP18577 417 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 S1PR1P21453 382 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 FPR1P21462 350 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 OR1D4P47884 311 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 ALDH3A2P51648 485 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 PSPHP78330 225 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 ELAVL1Q15717 326 aaKnown RBP14.19□□□□□ -0.14
SCLT1-209ENST00000511426 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SLC44A2Q8IWA5 706 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SUMF1Q8NBK3 374 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SLC16A11Q8NCK7 471 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 PLPP5Q8NEB5 264 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 LRFN5Q96NI6 719 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 PTCHD1Q96NR3 888 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF300Q96RE9 604 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms