RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 OR10J1P30954 320 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 HMGCLP35914 325 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 IDH3AP50213 366 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 RAB28P51157 221 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 CRISP3P54108 245 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 TBX4P57082 545 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 RPS3AP61247 264 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 IRF8Q02556 426 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 NHLH2Q02577 135 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 TMEM115Q12893 351 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 MKRN4PQ13434 485 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 HES1Q14469 280 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PCBP1Q15365 356 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP53-205ENST00000509769 TAF1AQ15573 450 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 CTF1Q16619 201 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 POU2AF1Q16633 256 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.42□□□□□ -1.86
USP53-205ENST00000509769 PROX2Q3B8N5 592 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZACNQ401N2 412 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 CHRFAM7AQ494W8 412 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 DESI1Q6ICB0 168 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 OR52E8Q6IFG1 317 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 TECPR1Q7Z6L1 1165 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SGPP2Q8IWX5 399 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 C4orf19Q8IY42 314 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 FAM71E2Q8N5Q1 922 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 BANPQ8N9N5 519 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF610Q8N9Z0 462 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 OR10K1Q8NGX5 313 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 TRMT10AQ8TBZ6 339 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 RAET1EQ8TD07 263 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 DUSP19Q8WTR2 217 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 EDAQ92838 391 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 COQ8BQ96D53 544 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SLC41A2Q96JW4 573 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 CXorf58Q96LI9 332 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF582Q96NG8 517 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF317Q96PQ6 595 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 CYP2S1Q96SQ9 504 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SLC25A21Q9BQT8 299 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF2Q9BSG1 426 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 OR10A5Q9H207 317 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SPNS1Q9H2V7 528 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 CDH20Q9HBT6 801 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 POPDC3Q9HBV1 291 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 HMX1Q9NP08 348 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 PXMP2Q9NR77 195 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SIRT7Q9NRC8 400 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 FBXO6Q9NRD1 293 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 MAN2C1Q9NTJ4 1040 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 DTLQ9NZJ0 730 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 IKZF2Q9UKS7 526 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 AKT3Q9Y243 479 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF281Q9Y2X9 895 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SLC6A5Q9Y345 797 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ETV7Q9Y603 341 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF780BQ9Y6R6 833 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 C13orf42A0A1B0GVH6 325 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PQLC2LA1A4F0 135 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 H7BYZ3 331 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 M0R1X1 148 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PPM1DO15297 605 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 IRAK2O43187 625 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 B4GALT5O43286 388 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 MSI1O43347 362 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 MMP20O60882 483 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 NUDT3O95989 172 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ORM1P02763 201 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 DBIP07108 87 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 OR4Q2P0C623 313 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZNF888P0CJ79 500 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 CPB1P15086 417 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 LAG3P18627 525 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PRPS1L1P21108 318 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PRKACGP22612 351 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 CCND3P30281 292 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 G6PCP35575 357 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 GRK6P43250 576 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SLC11A1P49279 550 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ERFP50548 548 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 DNAJB13P59910 316 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ERVPABLB-1P60509 514 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ST3GAL3Q11203 375 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PNRC1Q12796 327 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 HNRNPA0Q13151 305 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 GRB10Q13322 594 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 SIM2Q14190 667 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 GRM2Q14416 872 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 PDZD11Q5EBL8 140 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 ZBTB37Q5TC79 503 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 FAM69BQ5VUD6 431 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 LCN8Q6JVE9 175 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 KCTD18Q6PI47 426 aaPredicted RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 CD300LGQ6UXG3 332 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 MEX3BQ6ZN04 569 aaKnown RBP3.42□□□□□ -1.86
USP53-205ENST00000509769 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 OR2AJ1Q8NGZ0 328 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 OR5AK2Q8NH90 309 aa3.42□□□□□ -1.86
USP53-205ENST00000509769 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms