RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 KRT6BP04259 564 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 ATP1B1P05026 303 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 SBK3P0C264 359 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 BMP7P18075 431 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 HMOX2P30519 316 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 CEACAM8P31997 349 aaPredicted RBP14.06□□□□□ -0.16
TPM3-219ENST00000509409 TIMP3P35625 211 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 PEX19P40855 299 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 KRT6CP48668 564 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 DCAF7P61962 342 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 MGAT2Q10469 447 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 RASA2Q15283 850 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 TRMT12Q53H54 448 aaKnown RBP14.06□□□□□ -0.16
TPM3-219ENST00000509409 FNDC7Q5VTL7 733 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 VASNQ6EMK4 673 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 DESI1Q6ICB0 168 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 SLC30A6Q6NXT4 461 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 CCDC116Q8IYX3 515 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 METTL6Q8TCB7 284 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 NRGNQ92686 78 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 NODALQ96S42 347 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 UGT2B28Q9BY64 529 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 UBQLN3Q9H347 655 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 EHD3Q9NZN3 535 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 UTS2RQ9UKP6 389 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 HCFC1P51610 2035 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 ACOX3O15254 700 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 ICOSLGO75144 302 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 ULK1O75385 1050 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 REM1O75628 298 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 PCSK2P16519 638 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 PTPN6P29350 595 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 DNAJA1P31689 397 aaKnown RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 ASCL1P50553 236 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 AGFG1P52594 562 aaKnown RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 LTB4RQ15722 352 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 UNC50Q53HI1 259 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 TCHHL1Q5QJ38 904 aaPredicted RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 ZNF678Q5SXM1 525 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 FAM219BQ5XKK7 198 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 NSUN5P2Q63ZY6 315 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 TMEM151AQ8N4L1 468 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 NAXEQ8NCW5 288 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 SIMC1Q8NDZ2 872 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 FAM83FQ8NEG4 500 aaPredicted RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 GOT1L1Q8NHS2 421 aaPredicted RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 RDH11Q8TC12 318 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 RNASE6Q93091 150 aaKnown RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 HGDQ93099 445 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 TMCO6Q96DC7 493 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 MTBPQ96DY7 904 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 WDYHV1Q96HA8 205 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 GPATCH1Q9BRR8 931 aaKnown RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 OSBPL11Q9BXB4 747 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 C1QTNF3Q9BXJ4 246 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 PRDM14Q9GZV8 571 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 CRIM1Q9NZV1 1036 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 TMEM216Q9P0N5 145 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 ZNF629Q9UEG4 869 aaPredicted RBP14.05□□□□□ -0.16
TPM3-219ENST00000509409 ZNF639Q9UID6 485 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 ZNF225Q9UK10 706 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 DLGAP4Q9Y2H0 992 aa14.05□□□□□ -0.16
TPM3-219ENST00000509409 GNG14A0A1W2PPG7 69 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 CTAG2O75638 210 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 BCAS2O75934 225 aaPredicted RBP14.04□□□□□ -0.16
TPM3-219ENST00000509409 CBX7O95931 251 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 HSD3B1P14060 373 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 DRD5P21918 477 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 HSD3B2P26439 372 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 ECHS1P30084 290 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 PPICP45877 212 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 NAGLUP54802 743 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 MRPS35P82673 323 aaKnown RBP14.04□□□□□ -0.16
TPM3-219ENST00000509409 DUSP2Q05923 314 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 BTKQ06187 659 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 CSTF3Q12996 717 aaKnown RBP14.04□□□□□ -0.16
TPM3-219ENST00000509409 SNTA1Q13424 505 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 RCAN2Q14206 197 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 NHSL2Q5HYW2 709 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 FBXW10Q5XX13 1052 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 TIFABQ6ZNK6 161 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 GPRIN3Q6ZVF9 776 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 OR14L1PQ8NHC6 308 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 EXOSC8Q96B26 276 aaKnown RBP14.04□□□□□ -0.16
TPM3-219ENST00000509409 CNRIP1Q96F85 164 aaPredicted RBP14.04□□□□□ -0.16
TPM3-219ENST00000509409 ZNF681Q96N22 645 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 CALHM2Q9HA72 323 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 GALNT9Q9HCQ5 603 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 SERHLQ9NQF3 203 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 GIMAP4Q9NUV9 329 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 HEY2Q9UBP5 337 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 MCM8Q9UJA3 840 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 CELSR1Q9NYQ6 3014 aa14.04□□□□□ -0.16
TPM3-219ENST00000509409 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CD8B2A6NJW9 211 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 SNPHO15079 494 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 PCDH7O60245 1069 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms