RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PIGQQ9BRB3 760 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 SLC39A3Q9BRY0 314 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 CENPKQ9BS16 269 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 OSBPL11Q9BXB4 747 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF717Q9BY31 904 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 OR10A5Q9H207 317 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 WDR41Q9HAD4 459 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 SERHLQ9NQF3 203 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 LYARQ9NX58 379 aaKnown RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 MAPRE3Q9UPY8 281 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 TSC22D4Q9Y3Q8 395 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ASB4Q9Y574 426 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 CADP27708 2225 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 A0A0A6YYD5 115 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 A0A1W2PR48 441 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 WASHC1A8K0Z3 465 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 CCNT2O60583 730 aaKnown RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 NR2F6P10588 404 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 PCNAP12004 261 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 GPX3P22352 226 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 SRD5A2P31213 254 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 GMPRP36959 345 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 ELK3P41970 407 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 PIK3CBP42338 1070 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 FNTAP49354 379 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 MGAT5Q09328 741 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 ETFDHQ16134 617 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 BCL2A1Q16548 175 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 KBTBD12Q3ZCT8 623 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 C10orf62Q5T681 223 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 OR52E8Q6IFG1 317 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 SH2D5Q6ZV89 423 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF550Q7Z398 422 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 BTLAQ7Z6A9 289 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 MILR1Q7Z6M3 343 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 GALNT12Q8IXK2 581 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 PDIK1LQ8N165 341 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 WDSUB1Q8N9V3 476 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 OR7G1Q8NGA0 311 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 HUS1BQ8NHY5 278 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 HGDQ93099 445 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 PGM2Q96G03 612 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 CFAP36Q96G28 342 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 NODALQ96S42 347 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 NAP1L3Q99457 506 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 MCMBPQ9BTE3 642 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 PLA2G12AQ9BZM1 189 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 CD244Q9BZW8 370 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 NXF5Q9H1B4 397 aaKnown RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 RHOJQ9H4E5 214 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 DDX31Q9H8H2 851 aaKnown RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 GALNT9Q9HCQ5 603 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 CHMP2BQ9UQN3 213 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 MRPS18CQ9Y3D5 142 aaKnown RBP8.49□□□□□ -1.05
NEDD9-211ENST00000508546 JRKLQ9Y4A0 524 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 TEX264Q9Y6I9 313 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 ALPK2Q86TB3 2170 aa8.49□□□□□ -1.05
NEDD9-211ENST00000508546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 FRG2CA6NGY1 282 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 GLOD5A6NK44 160 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 ACOX3O15254 700 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 EMC8O43402 210 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CD5LO43866 347 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 TMPRSS11DO60235 418 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 EEDO75530 441 aaKnown RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 SLU7O95391 586 aaKnown RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 AIFM1O95831 613 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CGAP01215 116 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CT62P0C5K7 136 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 FAM58BPP0C7Q3 252 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CD8BP10966 210 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CD1DP15813 335 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 S1PR1P21453 382 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PTX3P26022 381 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PIK3R1P27986 724 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 BSGP35613 385 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 STARP49675 285 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 SLC12A2P55011 1212 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 ATP6V0D1P61421 351 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 POU4F1Q01851 419 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 FGFBP1Q14512 234 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PPP1R7Q15435 360 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 OR4D1Q15615 310 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 BEX5Q5H9J7 111 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 DESI1Q6ICB0 168 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 GRHL2Q6ISB3 625 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CYP20A1Q6UW02 462 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF704Q6ZNC4 412 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 C22orf34Q6ZV56 151 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 P4HA3Q7Z4N8 544 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PLCZ1Q86YW0 608 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 RNF175Q8N4F7 328 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF611Q8N823 705 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CNEP1R1Q8N9A8 125 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 MNS1Q8NEH6 495 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms