RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 AIFM2Q9BRQ8 373 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TRAF4Q9BUZ4 470 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PARD6BQ9BYG5 372 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 XYLT2Q9H1B5 865 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FN3KQ9H479 309 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ACTL8Q9H568 366 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM9Q9P0T7 183 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CRNNQ9UBG3 495 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PRODH2Q9UF12 536 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF490Q9ULM2 529 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PPM1HQ9ULR3 514 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SNX12Q9UMY4 172 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ENTPD2Q9Y5L3 495 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GX78 115 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF860A6NHJ4 632 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BTNL10A8MVZ5 291 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 G3V2T6 193 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 EIF3HO15372 352 aaKnown RBP eCLIP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NUAK1O60285 661 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 B4GALT3O60512 393 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CTSLP07711 333 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ANXA4P09525 319 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HK1P19367 917 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 EPHA3P29320 983 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR1D4P47884 311 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HK2P52789 917 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 JAM2P57087 298 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TAS2R40P59535 323 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MELKQ14680 651 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PTPRCAPQ14761 206 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPNMBQ14956 572 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CDK10Q15131 360 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SEC23BQ15437 767 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SAPCD1Q5SSQ6 148 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BEND4Q6ZU67 534 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 KMT5CQ86Y97 462 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MRPL41Q8IXM3 137 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CHDHQ8NE62 594 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC38A4Q969I6 547 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MAGEB18Q96M61 343 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OLFM3Q96PB7 478 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LMF1Q96S06 567 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NRSN2Q9GZP1 204 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 IL1RAPQ9NPH3 570 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SIRT3Q9NTG7 399 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LHX3Q9UBR4 397 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PACSIN3Q9UKS6 424 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 B3GALT1Q9Y5Z6 326 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NUP205Q92621 2012 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HEATR1Q9H583 2144 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1W2PPW3 197 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CCL22O00626 93 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ANKRD28O15084 1053 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ARPC2O15144 300 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CLOCKO15516 846 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GJB3O75712 270 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TSPAN9O75954 239 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CLDN9O95484 217 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 IL4RP24394 825 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HRH2P25021 359 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CTSKP43235 329 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CYB561P49447 251 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FHITP49789 147 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MAT1AQ00266 395 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPIBQ01892 262 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CHRNEQ04844 493 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MZT1Q08AG7 82 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PLCXD2Q0VAA5 305 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PDE7AQ13946 482 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 KEAP1Q14145 624 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TAB1Q15750 504 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PDK4Q16654 411 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LRIF1Q5T3J3 769 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC25A25Q6KCM7 469 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPESP1Q6UW49 350 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 IL20RBQ6UXL0 311 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZBTB49Q6ZSB9 765 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SCML4Q8N228 414 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF276Q8N554 614 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR5M9Q8NGP3 310 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 VANGL1Q8TAA9 524 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NDNFQ8TB73 568 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DNAJA4Q8WW22 397 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPRYD4Q8WW59 207 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CRYGNQ8WXF5 182 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 C3orf49Q96BT1 292 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CMTM7Q96FZ5 175 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 EAF1Q96JC9 268 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SFXN2Q96NB2 322 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TSSK3Q96PN8 268 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPR21Q99679 349 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NPAS2Q99743 824 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZFYVE21Q9BQ24 234 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPR87Q9BY21 358 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LHPPQ9H008 270 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPHK1Q9NYA1 384 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM53CQ9NYF3 392 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 RDH8Q9NYR8 311 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ASH2LQ9UBL3 628 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TP53TG5Q9Y2B4 290 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms