RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OR8K5Q8NH50 307 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 RAET1EQ8TD07 263 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 C16orf78Q8WTQ4 265 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 SMG7Q92540 1137 aaKnown RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ALG14Q96F25 216 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF354BQ96LW1 612 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 A4GALTQ9NPC4 353 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 CBLCQ9ULV8 474 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 NUBP2Q9Y5Y2 271 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 MEIKINA0A087WXM9 373 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 TOR1AO14656 332 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 HRO43593 1189 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 PPM1BO75688 479 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 UQCRC2P22695 453 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 THPOP40225 353 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 SLC1A3P43003 542 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 RFX3P48380 749 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 MAP2K6P52564 334 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF155Q12901 538 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 GPR17Q13304 367 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 RFLNAQ6ZTI6 216 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 SHFQ7M4L6 423 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 NR2C2APQ86WQ0 139 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 KLHDC8AQ8IYD2 350 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 LRRC56Q8IYG6 542 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 TRPV1Q8NER1 839 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 DBF4BQ8NFT6 615 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 NXPE2Q96DL1 559 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 NLNQ9BYT8 704 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 DPAGT1Q9H3H5 408 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 PRM3Q9NNZ6 103 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 MYNNQ9NPC7 610 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 ENAMQ9NRM1 1142 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 STOX2Q9P2F5 926 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 A4GNTQ9UNA3 340 aa16.15■□□□□ 0.18
SQSTM1-211ENST00000506690 CENPFP49454 3210 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 TEX13CA0A0J9YWL9 993 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 C2orf92A0A1B0GVN3 265 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 A0A1W2PRQ8 180 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 C5orf58C9J3I9 102 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CASC3O15234 703 aaKnown RBP16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 EPHX1P07099 455 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 ATP1B2P14415 290 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CELP19835 753 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 KCNJ5P48544 419 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 SMSP52788 366 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 TAP2Q03519 686 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 ACSM1Q08AH1 577 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CRHR2Q13324 411 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 VASNQ6EMK4 673 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 GLB1LQ6UWU2 654 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 LHFPL3Q86UP9 236 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 MS4A15Q8N5U1 240 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 HORMAD2Q8N7B1 307 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC9A6Q92581 669 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 TMEM19Q96HH6 336 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 GPA33Q99795 319 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 MRPL9Q9BYD2 267 aaKnown RBP16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 BRD9Q9H8M2 597 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 ASB6Q9NWX5 421 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 MAB21L2Q9Y586 359 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 A0A1W2PPL8 197 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 TUBAL3A6NHL2 446 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 TCRBP04435 133 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 ZP3P21754 424 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CSKP41240 450 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 PIN1Q13526 163 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 HSD17B12Q53GQ0 312 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 EOGTQ5NDL2 527 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 ZBTB44Q8NCP5 570 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 OSGEPL1Q9H4B0 414 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CXorf36Q9H7Y0 433 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 DOCK6Q96HP0 2047 aa16.14■□□□□ 0.17
SQSTM1-211ENST00000506690 CD8B2A6NJW9 211 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 GPR171O14626 319 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 TBL1XO60907 577 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 SULT1A3P0DMM9 295 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 SULT1A4P0DMN0 295 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 CD8BP10966 210 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 DNASE1P24855 282 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 RBMS1P29558 406 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 TAS2R50P59544 299 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 DCDC1P59894 354 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 RPS26P62854 115 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 PTSQ03393 145 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 SPDYE7PQ495Y7 208 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 CLLU1OSQ5K130 101 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 ENTPD8Q5MY95 495 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 HECTD3Q5T447 861 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 MED27Q6P2C8 311 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 B3GLCTQ6Y288 498 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 KIAA0907Q7Z7F0 614 aaPredicted RBP16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 MRGPREQ86SM8 312 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 OAFQ86UD1 273 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 DCAF4L2Q8NA75 395 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 WDR48Q8TAF3 677 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 ADAMTS19Q8TE59 1207 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms