RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 POMZP3Q6PJE2 187 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 UBE3DQ7Z6J8 389 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 YTHDF3Q7Z739 585 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 PRR22Q8IZ63 422 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 CIARTQ8N365 385 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 SPATA6LQ8N4H0 392 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C9orf106Q8NAJ2 232 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 SIMC1Q8NDZ2 872 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 ANKRD49Q8WVL7 239 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 TANKQ92844 425 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 RIT1Q92963 219 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 ABTB1Q969K4 478 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 NTNG2Q96CW9 530 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 COX4I2Q96KJ9 171 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 DACH2Q96NX9 599 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 SECISBP2Q96T21 854 aaKnown RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 CCL19Q99731 98 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 BDH2Q9BUT1 245 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 MS4A8Q9BY19 250 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 UGT2B28Q9BY64 529 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 OR51B5Q9H339 312 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 METTL7AQ9H8H3 244 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 PLAC1Q9HBJ0 212 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 NDRG3Q9UGV2 375 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 ADGRE2Q9UHX3 823 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 PHF11Q9UIL8 331 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 ZNF490Q9ULM2 529 aaPredicted RBP8.27□□□□□ -1.09
DHFR-202ENST00000504396 C15orf41Q9Y2V0 281 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 PSAT1Q9Y617 370 aa8.27□□□□□ -1.09
DHFR-202ENST00000504396 DOCK7Q96N67 2140 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 A0A1W2PPR1 153 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 TRIM64A6NGJ6 449 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 TRIM64BA6NI03 449 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 GLOD5A6NK44 160 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 TAPBPO15533 448 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 PRAMEF4O60810 478 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 SNX4O95219 450 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 HPNP05981 417 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 CD22P20273 847 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 ATP6V0D1P61421 351 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 POU4F1Q01851 419 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 FOXF2Q12947 444 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 NHSL2Q5HYW2 709 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 VASNQ6EMK4 673 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 MED27Q6P2C8 311 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 SCIMPQ6UWF3 145 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 YRDCQ86U90 279 aaKnown RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 GPR180Q86V85 440 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 CXorf67Q86X51 503 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 ST13P4Q8IZP2 240 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 GCNT2Q8N0V5 402 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 SPPL2AQ8TCT8 520 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 ZNF473Q8WTR7 871 aaKnown RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 SMPDL3BQ92485 455 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 PIGTQ969N2 578 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 ISL2Q96A47 359 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 INTS12Q96CB8 462 aaKnown RBP8.26□□□□□ -1.09
DHFR-202ENST00000504396 TSPAN17Q96FV3 270 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 CMTM7Q96FZ5 175 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 WDYHV1Q96HA8 205 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 ZFP3Q96NJ6 502 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 SFXN3Q9BWM7 321 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 RHOJQ9H4E5 214 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 CAB39LQ9H9S4 337 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 SNX15Q9NRS6 342 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 TEX264Q9Y6I9 313 aa8.26□□□□□ -1.09
DHFR-202ENST00000504396 FBN3Q75N90 2809 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 PHGDHO43175 533 aaKnown RBP8.25□□□□□ -1.09
DHFR-202ENST00000504396 CCDC166P0CW27 439 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 NR2F6P10588 404 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 SSTR4P31391 388 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 DIO3P55073 304 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 ARL4CP56559 192 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 SLC37A1P57057 533 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 EEF1A1P68104 462 aaKnown RBP8.25□□□□□ -1.09
DHFR-202ENST00000504396 NNATQ16517 81 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 EEF1A1P5Q5VTE0 462 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 KHDRBS2Q5VWX1 349 aaKnown RBP8.25□□□□□ -1.09
DHFR-202ENST00000504396 OR4C11Q6IEV9 310 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 CYP20A1Q6UW02 462 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 PLXDC2Q6UX71 529 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 ANGPTL8Q6UXH0 198 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 LRRC70Q7Z2Q7 622 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 ZDHHC13Q8IUH4 622 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 LAS2Q8IYD9 372 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 ZCCHC7Q8N3Z6 543 aaKnown RBP8.25□□□□□ -1.09
DHFR-202ENST00000504396 RNF175Q8N4F7 328 aa8.25□□□□□ -1.09
DHFR-202ENST00000504396 PDPRQ8NCN5 879 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms