RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 BCAP29Q9UHQ4 241 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PCDHA7Q9UN72 937 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 B3GALT5Q9Y2C3 310 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 IFT52Q9Y366 437 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZHX2Q9Y6X8 837 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CCDC171Q6TFL3 1326 aa3.9□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CEP290O15078 2479 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LOC285556D6RIA3 1793 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DOCK3Q8IZD9 2030 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 A0A087WUV0 522 aaPredicted RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 IGKV6D-41A0A0C4DH26 115 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PRSS46E5RG02 174 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PPIAL4DF5H284 164 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 F8VVB4 439 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 F8VWA3 439 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF701M0R085 212 aaPredicted RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PSMD11O00231 422 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ARPC3O15145 178 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KRT86O43790 486 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR10H2O60403 315 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ATP6AP2O75787 350 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CAVIN2O95810 425 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EGFP01133 1207 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OPN1LWP04000 364 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NUDT17P0C025 328 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZCCHC18P0CG32 403 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CBSLP0DN79 551 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CETPP11597 493 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MAOAP21397 527 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PTGER4P35408 488 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CBSP35520 551 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ALDH3B1P43353 468 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MAGEA11P43364 429 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC6A8P48029 635 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LEPRP48357 1165 aaKnown RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NR0B1P51843 470 aaKnown RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BLVRAP53004 296 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HMGCS2P54868 508 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CDH4P55283 916 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KCNK10P57789 538 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SELENOVP59797 346 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CSNK2A1P68400 391 aaPredicted RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZXDBP98169 803 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CACNG1Q06432 222 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRAF1Q13077 416 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NME3Q13232 169 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 VEZF1Q14119 521 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KEAP1Q14145 624 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GPR18Q14330 331 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HKDC1Q2TB90 917 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DCAF6Q58WW2 860 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 WLSQ5T9L3 541 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RAET1LQ5VY80 246 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM225Q6GV28 225 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FAM109BQ6ICB4 259 aaPredicted RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EIF3MQ7L2H7 374 aaKnown RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 VTCN1Q7Z7D3 282 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMPRSS11BQ86T26 416 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TPRA1Q86W33 373 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LONP2Q86WA8 852 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TBC1D10CQ8IV04 446 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CROCCP3Q8IVE0 287 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SFTPA2Q8IWL1 248 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GCSAMQ8N6F7 178 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CEP112Q8N8E3 955 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ANKFN1Q8N957 763 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC38A9Q8NBW4 561 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRPV3Q8NET8 790 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CSNK2A3Q8NEV1 391 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR1E3Q8WZA6 343 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PHYHIPQ92561 330 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MTERF3Q96E29 417 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GPR137Q96N19 417 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TSNARE1Q96NA8 513 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RPRD1AQ96P16 312 aaPredicted RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM204Q9BSN7 226 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NTMT1Q9BV86 223 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRMT61BQ9BVS5 477 aaKnown RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TDRD1Q9BXT4 1180 aaKnown RBP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC2A11Q9BYW1 496 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RGCCQ9H4X1 137 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZFP14Q9HCL3 533 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GSN-AS1Q9NRJ2 163 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NUDT15Q9NV35 164 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC2A8Q9NY64 477 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ONECUT1Q9UBC0 465 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC9A2Q9UBY0 812 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FZD10Q9ULW2 581 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MYO6Q9UM54 1294 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KLK4Q9Y5K2 254 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZMYM6O95789 1325 aa3.89□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LAMA4Q16363 1823 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RLFQ13129 1914 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms