RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MID1IP1Q9NPA3 183 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 GIMAP4Q9NUV9 329 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ZNF639Q9UID6 485 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 GRID1Q9ULK0 1009 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 TIMM22Q9Y584 194 aa10.96□□□□□ -0.65
MED28-203ENST00000503945 ZNF407Q9C0G0 2248 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 A0A1W2PPM1 405 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 FAM90A27PA6NNH2 459 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 H3BQF6 201 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 ACOX3O15254 700 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 CRCPO75575 148 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 PPM1BO75688 479 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 CHN1P15882 459 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 GPX3P22352 226 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 EXOSC7Q15024 291 aaKnown RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 CCDC153Q494R4 210 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 CFAP157Q5JU67 520 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 TCHHL1Q5QJ38 904 aaPredicted RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 C1orf185Q5T7R7 199 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 CES4AQ5XG92 561 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 SLC30A6Q6NXT4 461 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 FAM180BQ6P0A1 224 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 PRR22Q8IZ63 422 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 MMP21Q8N119 569 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 OR52R1Q8NGF1 315 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 OR1J4Q8NGS1 313 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 CTHRC1Q96CG8 243 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 TMCO6Q96DC7 493 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 CNRIP1Q96F85 164 aaPredicted RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 TIMP4Q99727 224 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 TXLNGYQ9BZA5 131 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 PPCSQ9HAB8 311 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 MAT2BQ9NZL9 334 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 SPRR3Q9UBC9 169 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 HEY2Q9UBP5 337 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 FAM215AQ9Y5M1 114 aa10.95□□□□□ -0.66
MED28-203ENST00000503945 PHF3Q92576 2039 aaKnown RBP10.95□□□□□ -0.66
MED28-203ENST00000503945 DNAJC13O75165 2243 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SPG11Q96JI7 2443 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SERTM1A2A2V5 107 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 LRRC3CA6NJW4 275 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 HSPB2A8KAH6 182 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 PCDH7O60245 1069 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 ICOSLGO75144 302 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 GLRA3O75311 464 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 REM1O75628 298 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 CBR3O75828 277 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 EPPINO95925 133 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 HPNP05981 417 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 IL3P08700 152 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 ANXA4P09525 319 aaPredicted RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 GCKP35557 465 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 GSTM5P46439 218 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 EMDP50402 254 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 NAGLUP54802 743 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 RAE1P78406 368 aaKnown RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 HMGCS1Q01581 520 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 C2orf80Q0P641 193 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SNTA1Q13424 505 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 HSPB2Q16082 182 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 BICRALQ6AI39 1079 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 TIGD3Q6B0B8 471 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SCIMPQ6UWF3 145 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 DMRTC2Q8IXT2 367 aaPredicted RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 PM20D2Q8IYS1 436 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 CCDC63Q8NA47 563 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 C16orf78Q8WTQ4 265 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 EXOSC8Q96B26 276 aaKnown RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 OMA1Q96E52 524 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 APIPQ96GX9 242 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 TMEM41AQ96HV5 264 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 BBS4Q96RK4 519 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 ACPTQ9BZG2 426 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SLC6A15Q9H2J7 730 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 SLC35C2Q9NQQ7 365 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 Q9UFV3 132 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 GPR55Q9Y2T6 319 aaPredicted RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 WBP11Q9Y2W2 641 aaKnown RBP10.94□□□□□ -0.66
MED28-203ENST00000503945 PLLPQ9Y342 182 aa10.94□□□□□ -0.66
MED28-203ENST00000503945 G3V2L1 256 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 GNB5O14775 395 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 DIAPH2O60879 1101 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 CBX7O95931 251 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 IL2RAP01589 272 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 CPA3P15088 417 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 PCSK2P16519 638 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ENDOUP21128 410 aaKnown RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 MSX1P28360 303 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 TIA1P31483 386 aaKnown RBP eCLIP10.93□□□□□ -0.663e-9■■■□□ 19.2
MED28-203ENST00000503945 CRHR1P34998 444 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 KRT20P35900 424 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ADH7P40394 386 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 SLCO1A2P46721 670 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 CDK9P50750 372 aaKnown RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 PSPHP78330 225 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms