RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MYH2Q9UKX2 1941 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MYH13Q9UKX3 1938 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 A0A0C4DFX4 3053 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TRAV18A0A075B6X5 111 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TRAV25A0A0B4J276 109 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RNF222A6NCQ9 220 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ANTXRLA6NF34 631 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 WASHC1A8K0Z3 465 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RSPH10B2B2RC85 870 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 NPIPA3F8WFD2 350 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SCO2O43819 266 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 NIPSNAP2O75323 286 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 EPOP01588 193 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MBP02144 154 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CHRNA1P02708 482 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 LCKP06239 509 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TPM3P06753 285 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RSPH10BP0C881 870 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 UMPSP11172 480 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 FCGR1AP12314 374 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 IRF2P14316 349 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TSPAN8P19075 237 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CALML3P27482 149 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 GNA11P29992 359 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 BDKRB2P30411 391 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SRD5A2P31213 254 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TNFSF8P32971 234 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CYLC1P35663 651 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PLA2G5P39877 138 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ALDH3B1P43353 468 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MAGEA8P43361 318 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TPMTP51580 245 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCR4P51679 360 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 NAPAP54920 295 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CLDN20P56880 219 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 C21orf59P57076 290 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MYL6P60660 151 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 DYNLL1P63167 89 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RPP38P78345 283 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CSTF1Q05048 431 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF415Q09FC8 603 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 EFEMP1Q12805 493 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MERTKQ12866 999 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF177Q13360 481 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RBBP5Q15291 538 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TGFBIQ15582 683 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 FAM83EQ2M2I3 478 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PARP6Q2NL67 630 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM44Q2T9K0 475 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 HNRNPA1L2Q32P51 320 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF528Q3MIS6 628 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 AMZ1Q400G9 498 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PHLDA2Q53GA4 152 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 GRTP1Q5TC63 336 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 LIPJQ5W064 366 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 C11orf63Q6NUN7 778 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 WASH2PQ6VEQ5 465 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCTD8Q6ZWB6 473 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 VRK3Q8IV63 474 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 FOXRED2Q8IWF2 684 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCDC36Q8IYA8 594 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC7A5P1Q8MH63 180 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PCDH20Q8N6Y1 951 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR4K1Q8NGD4 311 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR4L1Q8NH43 312 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAET1EQ8TD07 263 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MITD1Q8WV92 249 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC44A1Q8WWI5 657 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SEMA4DQ92854 862 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM18Q96B42 140 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 OTULINQ96BN8 352 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MTERF3Q96E29 417 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 COQ2Q96H96 371 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 HPDLQ96IR7 371 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ART5Q96L15 291 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 FUNDC2Q9BWH2 189 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPATA16Q9BXB7 569 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ANKRD60Q9BZ19 345 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZMYND12Q9H0C1 365 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 C5orf66Q9H5L9 145 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 MOV10Q9HCE1 1003 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 NUDT15Q9NV35 164 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 SYBUQ9NX95 663 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 AHSPQ9NZD4 102 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF346Q9UL40 294 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 BARX2Q9UMQ3 279 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 LAMP3Q9UQV4 416 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 KLF2Q9Y5W3 355 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 KIAA0100Q14667 2235 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 PTPRFP10586 1907 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 AK9Q5TCS8 1911 aa3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 GREB1LQ9C091 1923 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 ATXN2Q99700 1313 aaKnown RBP3.95□□□□□ -1.78
HMGB1P21-201ENST00000502313 LOC285556D6RIA3 1793 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 RLFQ13129 1914 aa3.94□□□□□ -1.78
HMGB1P21-201ENST00000502313 ROBO3Q96MS0 1386 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms