RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.92
CLIP1-204ENST00000501271 CES1P1Q9UKY3 287 aa9.27□□□□□ -0.92
CLIP1-204ENST00000501271 A0A075B6Q4 140 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 MYL12BO14950 172 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SSX4O60224 188 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 F3P13726 295 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 C5AR1P21730 350 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 TEAD1P28347 426 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 IGFALSP35858 605 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 ETV5P41161 510 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 MC3RP41968 323 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 GIPRP48546 466 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 TGM4P49221 684 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 ETV1P50549 477 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 TPTEP56180 551 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 EFNB1P98172 346 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 CDK5Q00535 292 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 COX10Q12887 443 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 MLLT11Q13015 90 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SELENBP1Q13228 472 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 GPM6BQ13491 265 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 ENPP2Q13822 863 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 NDUFA9Q16795 377 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 FLYWCH1Q4VC44 716 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 LIPKQ5VXJ0 399 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 RNLSQ5VYX0 342 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SLC48A1Q6P1K1 146 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 IL17RCQ8NAC3 791 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 PROKR2Q8NFJ6 384 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 OR2L5Q8NG80 312 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 ZG16BQ96DA0 208 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SPATA5L1Q9BVQ7 753 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 RAB11FIP5Q9BXF6 653 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 PINK1Q9BXM7 581 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SFXN1Q9H9B4 322 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 CERS4Q9HA82 394 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 EQTNQ9NQ60 294 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 C14orf119Q9NWQ9 140 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 OBP2AQ9NY56 170 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SEC14L4Q9UDX3 406 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 TESQ9UGI8 421 aaKnown RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 APOBEC3BQ9UH17 382 aaKnown RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 STUB1Q9UNE7 303 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 DIMT1Q9UNQ2 313 aaKnown RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 ENTPD4Q9Y227 616 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SLC17A4Q9Y2C5 497 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 CARD8Q9Y2G2 431 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 GPR55Q9Y2T6 319 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-204ENST00000501271 GPSM3Q9Y4H4 160 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 SCN2AQ99250 2005 aa9.27□□□□□ -0.93
CLIP1-204ENST00000501271 A0A087WUU8 490 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 HYKKA2RU49 373 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF670-ZNF695F2Z2N8 137 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CASC3O15234 703 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 NARSO43776 548 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 APOL3O95236 402 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ADH1BP00325 375 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 FHP07954 510 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 PSMA1P25786 263 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 TNFSF8P32971 234 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 GAS1P54826 345 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SEC13P55735 322 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SNRPNP63162 240 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 TCEA2Q15560 299 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ENTPD8Q5MY95 495 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 GDPD3Q7L5L3 318 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 DGLUCYQ7Z3D6 616 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 LSRQ86X29 649 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 VRK2Q86Y07 508 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF513Q8N8E2 541 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 OR56A1Q8NGH5 318 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 OR8D4Q8NGM9 314 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 OR9A2Q8NGT5 310 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CEP19Q96LK0 163 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 OR7D2Q96RA2 312 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SLC30A2Q9BRI3 323 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 RACGAP1Q9H0H5 632 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SLC6A17Q9H1V8 727 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SLC38A1Q9H2H9 487 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SNTG1Q9NSN8 517 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 GDE1Q9NZC3 331 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CHST2Q9Y4C5 530 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 PCDHGA4Q9Y5G9 962 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 A0A0G2JPF8 293 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 PNMA8CA0A1B0GUJ8 204 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 A0A1W2PQU0 124 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 HNRNPCL2B2RXH8 293 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 HNRNPCL3B7ZW38 293 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 LOC110117498-PIK3R3F6TDL0 507 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SNX4O95219 450 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 RAB36O95755 333 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 HNRNPCL4P0DMR1 293 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 MAT2AP31153 395 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 AHRP35869 848 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 TMED10P49755 219 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CHRNEQ04844 493 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms