RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 GPR174Q9BXC1 333 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 RNF41Q9H4P4 317 aaPredicted RBP1.85□□□□□ -2.11
RBM39-242ENST00000498280 ELL3Q9HB65 397 aaPredicted RBP1.85□□□□□ -2.11
RBM39-242ENST00000498280 HOMER3Q9NSC5 361 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 STARD5Q9NSY2 213 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 NINJ2Q9NZG7 142 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 ARMCX1Q9P291 453 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 IL20RAQ9UHF4 553 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 EMCNQ9ULC0 261 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 CCPG1Q9ULG6 757 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 PLA2G4CQ9UP65 541 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 MRPL11Q9Y3B7 192 aaKnown RBP1.85□□□□□ -2.11
RBM39-242ENST00000498280 FER1L5A0AVI2 2057 aa1.85□□□□□ -2.11
RBM39-242ENST00000498280 H3BMH7 237 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CYB561D2O14569 222 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PHOX2AO14813 284 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ARPC1BO15143 372 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 ZNF354AO60765 605 aaPredicted RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 ZNF253O75346 499 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SH3BGRLO75368 114 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PTBP3O95758 552 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 HPP00738 406 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 RPA1P27694 616 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PPP2R1BP30154 601 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PRDX2P32119 198 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SAA4P35542 130 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SGSHP51688 502 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SLC7A2P52569 658 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ATXN3P54252 364 aaPredicted RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 MFAP2P55001 183 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 VCPP55072 806 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 SLC26A5P58743 744 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 HAND2P61296 217 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 MYBPC1Q00872 1141 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 IL1RL1Q01638 556 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CRMP1Q14194 572 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 GAMTQ14353 236 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ABRAXAS2Q15018 415 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 KARSQ15046 597 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 ZNF699Q32M78 642 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 C14orf28Q4W4Y0 310 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PARP10Q53GL7 1025 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 VWA2Q5GFL6 755 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 LDLRAP1Q5SW96 308 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 LINC00242Q5T6M2 205 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SEL1L2Q5TEA6 688 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ZCCHC12Q6PEW1 402 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CNSTQ6PJW8 725 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 FAM159AQ6UWV7 190 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ABRAXAS1Q6UWZ7 409 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CWC27Q6UX04 472 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 APOOLQ6UXV4 268 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CEACAM19Q7Z692 300 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 HIPK1Q86Z02 1210 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SLC39A11Q8N1S5 342 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 KDM8Q8N371 416 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 FGFRL1Q8N441 504 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 COLGALT1Q8NBJ5 622 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ZNF671Q8TAW3 534 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SAMD8Q96LT4 415 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 CPXM1Q96SM3 734 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 TTYH2Q9BSA4 534 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 APOOQ9BUR5 198 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 FTHL17Q9BXU8 183 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 NACA2Q9H009 215 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ALG9Q9H6U8 611 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ESM1Q9NQ30 184 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 ABCC13Q9NSE7 274 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 SOHLH2Q9NX45 425 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.84□□□□□ -2.11
RBM39-242ENST00000498280 CNOT2Q9NZN8 540 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 MLXQ9UH92 298 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 RNF24Q9Y225 148 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 PIN4Q9Y237 131 aaKnown RBP1.84□□□□□ -2.11
RBM39-242ENST00000498280 SLC9A8Q9Y2E8 581 aa1.84□□□□□ -2.11
RBM39-242ENST00000498280 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
RBM39-242ENST00000498280 SYNJ2O15056 1496 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 TRAV9-2A0A087WT02 112 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 A0A087WWV3 80 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 A0A0J9YVX5 310 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 RNF103-CHMP3A0A140T963 221 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 ZNF840PA6NDX5 716 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 TRABD2BA6NFA1 517 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 ZNF487B1APH4 448 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 E9PAM4 449 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.83□□□□□ -2.12
RBM39-242ENST00000498280 SAP18O00422 153 aaKnown RBP1.83□□□□□ -2.12
RBM39-242ENST00000498280 E2F3O00716 465 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 EI24O14681 340 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 CFLARO15519 480 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 SDC3O75056 442 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 PDE5AO76074 875 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 STK17BO94768 372 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 ECDO95905 644 aaPredicted RBP1.83□□□□□ -2.12
RBM39-242ENST00000498280 GOT2P00505 430 aaKnown RBP1.83□□□□□ -2.12
RBM39-242ENST00000498280 PDGFBP01127 241 aaPredicted RBP1.83□□□□□ -2.12
RBM39-242ENST00000498280 FAM200BP0CF97 657 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 GP9P14770 177 aa1.83□□□□□ -2.12
RBM39-242ENST00000498280 RFC2P35250 354 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms