RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SOX18P35713 384 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 PRKAG1P54619 331 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 SLC37A1P57057 533 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 HBA1P69905 142 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 RNF4P78317 190 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 RCAN2Q14206 197 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 SPDYE7PQ495Y7 208 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 HLA-DQA1Q5Y7H0 255 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 SZRD1Q7Z422 152 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 ZNF615Q8N8J6 731 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 TSPEARQ8WU66 669 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 ITCHQ96J02 903 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 PANX1Q96RD7 426 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 ANKRA2Q9H9E1 313 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 ARMCX1Q9P291 453 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 PRODH2Q9UF12 536 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 C19orf53Q9UNZ5 99 aaPredicted RBP18.6■□□□□ 0.57
CTSD-206ENST00000497544 UPK1AO00322 258 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 PRAMEF2O60811 474 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 COQ9O75208 318 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 DCTN3O75935 186 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 ANP32DO95626 131 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 CBX7O95931 251 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 ITGB2P05107 769 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 SOAT1P35610 550 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 CCT3P49368 545 aaKnown RBP18.59■□□□□ 0.57
CTSD-206ENST00000497544 PRR5P85299 388 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 MYBPC3Q14896 1274 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 MAPRE2Q15555 327 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 FHL5Q5TD97 284 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 SLC5A8Q8N695 610 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 SIRT6Q8N6T7 355 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 ANKS4BQ8N8V4 417 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 NUP43Q8NFH3 380 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 OR8K3Q8NH51 312 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 BRIX1Q8TDN6 353 aaKnown RBP18.59■□□□□ 0.57
CTSD-206ENST00000497544 THAP3Q8WTV1 239 aaPredicted RBP18.59■□□□□ 0.57
CTSD-206ENST00000497544 EXTL1Q92935 676 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 CCDC115Q96NT0 180 aa18.59■□□□□ 0.57
CTSD-206ENST00000497544 SIRT3Q9NTG7 399 aaPredicted RBP18.59■□□□□ 0.57
CTSD-206ENST00000497544 ZNF223Q9UK11 482 aaPredicted RBP18.59■□□□□ 0.57
CTSD-206ENST00000497544 A0A1W2PP18 115 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 RFXANKO14593 260 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 RAPSNQ13702 412 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 C6orf10Q5SRN2 563 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 H3F3CQ6NXT2 135 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 ZNF621Q6ZSS3 439 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 RPS19BP1Q86WX3 136 aaKnown RBP18.58■□□□□ 0.56
CTSD-206ENST00000497544 OR2L13Q8N349 312 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 SIMC1Q8NDZ2 872 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 C16orf52Q8NHV5 167 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 PSMA8Q8TAA3 256 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 PSMF1Q92530 271 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 MOAP1Q96BY2 351 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 ZNF354BQ96LW1 612 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 ARHGAP9Q9BRR9 750 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 INPP5KQ9BT40 448 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 CDCP1Q9H5V8 836 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 CXorf36Q9H7Y0 433 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 GPR83Q9NYM4 423 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 TEKT2Q9UIF3 430 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 LEF1Q9UJU2 399 aaPredicted RBP18.58■□□□□ 0.56
CTSD-206ENST00000497544 VPS4AQ9UN37 437 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 NDUFAF1Q9Y375 327 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 LRBAP50851 2863 aa18.58■□□□□ 0.56
CTSD-206ENST00000497544 LOC100653049A0A140TA62 436 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 C2orf92A0A1B0GVN3 265 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 MKRN2OSH3BPM6 223 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 ANGPT2O15123 496 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 PRKNO60260 465 aaPredicted RBP18.57■□□□□ 0.56
CTSD-206ENST00000497544 KRT34O76011 436 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 CLPSP04118 112 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 FAM87AP0C7U9 286 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 CD1EP15812 388 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 CAPN3P20807 821 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 UQCRC2P22695 453 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 TRPC1P48995 793 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 MEP1AQ16819 746 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 AGAP7PQ5VUJ5 663 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 FCRLBQ6BAA4 426 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 BHLHB9Q6PI77 547 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 SLC2A7Q6PXP3 512 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 TMEM64Q6YI46 380 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 C9orf40Q8IXQ3 194 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 FAM26EQ8N5C1 309 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 TRIML2Q8N7C3 387 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 FDCSPQ8NFU4 85 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 NUBPLQ8TB37 319 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 FAM120BQ96EK7 910 aaKnown RBP18.57■□□□□ 0.56
CTSD-206ENST00000497544 AGAP4Q96P64 663 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 LRRC37BQ96QE4 947 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 GAL3ST4Q96RP7 486 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 SLC25A23Q9BV35 468 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 CCDC106Q9BWC9 280 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 MYLK2Q9H1R3 596 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 SLC52A3Q9NQ40 469 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 ZCCHC3Q9NUD5 404 aaKnown RBP18.57■□□□□ 0.56
CTSD-206ENST00000497544 NTMQ9P121 344 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 ITPR3Q14573 2671 aa18.57■□□□□ 0.56
CTSD-206ENST00000497544 EMDP50402 254 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms