RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SMPDL3BQ92485 455 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 WNT2BQ93097 391 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 ERP27Q96DN0 273 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 LCORQ96JN0 433 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 GPR78Q96P69 363 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 TRIB1Q96RU8 372 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 PIGMQ9H3S5 423 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 LIME1Q9H400 295 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 NOL11Q9H8H0 719 aaKnown RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 DMGDHQ9UI17 866 aaKnown RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 EXO1Q9UQ84 846 aaKnown RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 RPH3AQ9Y2J0 694 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 MRPS18CQ9Y3D5 142 aaKnown RBP15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 ARID1AO14497 2285 aa15.37■□□□□ 0.05
TRAPPC3-207ENST00000497251 WASHC1A8K0Z3 465 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 SNPHO15079 494 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 DIAPH2O60879 1101 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 RCBTB2O95199 551 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 ATE1O95260 518 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 KLK1P06870 262 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 TMIGD3P0DMS9 266 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 HOXB4P17483 251 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 S1PR1P21453 382 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 DRD5P21918 477 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 GPX3P22352 226 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 NEK2P51955 445 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 MAPK12P53778 367 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 TRA2BP62995 288 aaKnown RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 TTC19Q6DKK2 380 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 SLC48A1Q6P1K1 146 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 TMEM64Q6YI46 380 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 SAMD14Q8IZD0 417 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 METTL4Q8N3J2 472 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 FAM83FQ8NEG4 500 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 UCN3Q969E3 161 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 YIPF4Q9BSR8 244 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 FAIM2Q9BWQ8 316 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 EPB41L4BQ9H329 900 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 PLEKHF2Q9H8W4 249 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 BRF2Q9HAW0 419 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 NEUROD4Q9HD90 331 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 BEX4Q9NWD9 120 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 ZNF639Q9UID6 485 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 SLC6A5Q9Y345 797 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 PCDHA9Q9Y5H5 950 aa15.36■□□□□ 0.05
TRAPPC3-207ENST00000497251 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 FAM171A2A8MVW0 826 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 EEF1E1-BLOC1S5C9J1V9 151 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 TO15178 435 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 EEF1E1O43324 174 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 LRATO95237 230 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 CRHP06850 196 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 CT62P0C5K7 136 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 COL6A2P12110 1019 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 ARL1P40616 181 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 PPICP45877 212 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 NAGLUP54802 743 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 DIO3P55073 304 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 TSNAXIP1Q2TAA8 658 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 PRICKLE4Q2TBC4 344 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 EIPR1Q53HC9 387 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 SHEQ5VZ18 495 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 BICRALQ6AI39 1079 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 AAGABQ6PD74 315 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 ANGPTL8Q6UXH0 198 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 ADGRE4PQ86SQ3 457 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 DOK4Q8TEW6 326 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 CTHRC1Q96CG8 243 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 TMCO6Q96DC7 493 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 FMO2Q99518 471 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 OSBPL11Q9BXB4 747 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 FUT8Q9BYC5 575 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 SHCBP1LQ9BZQ2 653 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 OR2B2Q9GZK3 357 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 NXF5Q9H1B4 397 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 ELOVL6Q9H5J4 265 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 CPSF2Q9P2I0 782 aaKnown RBP15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 NDRG3Q9UGV2 375 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 CES1P1Q9UKY3 287 aa15.35■□□□□ 0.05
TRAPPC3-207ENST00000497251 MED12Q93074 2177 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 HMX2A2RU54 273 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 OR6C70A6NIJ9 312 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 OR7A17O14581 309 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 CASKO14936 926 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 ICOSLGO75144 302 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 SMIM24O75264 130 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 OTCP00480 354 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 HOXC12P31275 282 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 GMPRP36959 345 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 IRF9Q00978 393 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 SNTB1Q13884 538 aaKnown RBP15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 TECRLQ5HYJ1 363 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 WIPI1Q5MNZ9 446 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 MILR1Q7Z6M3 343 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 HGDQ93099 445 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 RBM24Q9BX46 236 aaKnown RBP15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 ACSS3Q9H6R3 686 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 NINJ2Q9NZG7 142 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 NFU1Q9UMS0 254 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 SNX6Q9UNH7 406 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms