RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 GPX2P18283 190 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 WT1P19544 449 aaPredicted RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 RPS26P62854 115 aaKnown RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 RGNQ15493 299 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 DNAL1Q4LDG9 190 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 COX20Q5RI15 118 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.98■□□□□ 0.31
RGP1-202ENST00000496906 RNF111Q6ZNA4 994 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 C10orf111Q8N326 155 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 C16orf52Q8NHV5 167 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 VPS50Q96JG6 964 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 IP6K3Q96PC2 410 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 THUMPD3Q9BV44 507 aaKnown RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 LRMDAQ9H2I8 198 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 KAT8Q9H7Z6 458 aaKnown RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 TMEM181Q9P2C4 612 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 ZNF223Q9UK11 482 aaPredicted RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 FBXL4Q9UKA2 621 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 CORO2BQ9UQ03 480 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 HEMK1Q9Y5R4 338 aaPredicted RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 NME4O00746 187 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 HPP00738 406 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 PRIM2P49643 509 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 CASP9P55211 416 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 ATP1A4Q13733 1029 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 EXT1Q16394 746 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 EXOSC6Q5RKV6 272 aaKnown RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 HOXB13Q92826 284 aaPredicted RBP16.98■□□□□ 0.31
RGP1-202ENST00000496906 VMP1Q96GC9 406 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 C16orf58Q96GQ5 468 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 VSTM2LQ96N03 204 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 ACTRT3Q9BYD9 372 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 DPH1Q9BZG8 443 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 RAD21L1Q9H4I0 556 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 FOLH1BQ9HBA9 442 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 PRODH2Q9UF12 536 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 DTX4Q9Y2E6 619 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 OR6C76A6NM76 312 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 KLK10O43240 276 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 CAPNS1P04632 268 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 MATN1P21941 496 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 MAN2A2P49641 1150 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 ZNF155Q12901 538 aaPredicted RBP16.97■□□□□ 0.31
RGP1-202ENST00000496906 FADDQ13158 208 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 BTBD16Q32M84 506 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 PLAG1Q6DJT9 500 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 CDC73Q6P1J9 531 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 ZCCHC12Q6PEW1 402 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
RGP1-202ENST00000496906 ASRGL1Q7L266 308 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 C9orf40Q8IXQ3 194 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 CDRT4Q8N9R6 151 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 CDRT15Q96T59 188 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 YIPF4Q9BSR8 244 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 ZNF160Q9HCG1 818 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 ADA2Q9NZK5 511 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 FAF1Q9UNN5 650 aaPredicted RBP16.97■□□□□ 0.31
RGP1-202ENST00000496906 CFL2Q9Y281 166 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 L3MBTL1Q9Y468 752 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 APC2O95996 2303 aa16.97■□□□□ 0.31
RGP1-202ENST00000496906 PEX12O00623 359 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 ETFAP13804 333 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 MAP3K8P41279 467 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 CRATP43155 626 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 MAGEA8P43361 318 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 CLCN2P51788 898 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 MYBPC3Q14896 1274 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 EBPQ15125 230 aaKnown RBP16.96■□□□□ 0.31
RGP1-202ENST00000496906 TNFAIP8L2Q6P589 184 aaPredicted RBP16.96■□□□□ 0.31
RGP1-202ENST00000496906 WDR53Q7Z5U6 358 aaPredicted RBP16.96■□□□□ 0.31
RGP1-202ENST00000496906 LGI4Q8N135 537 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 KIF2BQ8N4N8 673 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 HORMAD2Q8N7B1 307 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 OR5D16Q8NGK9 328 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 OR10A6Q8NH74 314 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 FBXO30Q8TB52 745 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 M1APQ8TC57 530 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 ELP5Q8TE02 316 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 JADE3Q92613 823 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 ECSITQ9BQ95 431 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 LMF2Q9BU23 707 aaKnown RBP16.96■□□□□ 0.31
RGP1-202ENST00000496906 ITPAQ9BY32 194 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 OR51I1Q9H343 314 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 PRPF19Q9UMS4 504 aaKnown RBP16.96■□□□□ 0.31
RGP1-202ENST00000496906 AP3M1Q9Y2T2 418 aa16.96■□□□□ 0.31
RGP1-202ENST00000496906 TRBV11-1A0A0K0K1C0 115 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 CDC14CA4D256 554 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 NKX2-8O15522 239 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 DNAJC8O75937 253 aaPredicted RBP16.95■□□□□ 0.3
RGP1-202ENST00000496906 ACP2P11117 423 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 BMP2P12643 396 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 KHKP50053 298 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 GZMMP51124 257 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 TXNL4AP83876 142 aaKnown RBP16.95■□□□□ 0.3
RGP1-202ENST00000496906 PSG6Q00889 435 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 CRTC2Q53ET0 693 aaPredicted RBP16.95■□□□□ 0.3
RGP1-202ENST00000496906 ATP1A1-AS1Q5TC04 95 aa16.95■□□□□ 0.3
RGP1-202ENST00000496906 HSDL2Q6YN16 418 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms