RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 FAM173AQ9BQD7 235 aa17.76■□□□□ 0.43
CTDSP1-213ENST00000496785 AKTIPQ9H8T0 292 aa17.76■□□□□ 0.43
CTDSP1-213ENST00000496785 SHANK1Q9Y566 2161 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 FRG2CA6NGY1 282 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 TTC36A6NLP5 189 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNF354AO60765 605 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 KRT20P35900 424 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 MC3RP41968 323 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 FRKP42685 505 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 C21orf58P58505 322 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 PMP22Q01453 160 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 RBPJQ06330 500 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 PTGR1Q14914 329 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNHIT3Q15649 155 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 TMEM107Q6UX40 140 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 LYPD8Q6UX82 237 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 BNC2Q6ZN30 1099 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 RGS9BPQ6ZS82 235 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 FAM47EQ6ZV65 393 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 ZFP62Q8NB50 900 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 OR7G2Q8NG99 324 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 PIWIL2Q8TC59 973 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 BTBD9Q96Q07 612 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 NXF5Q9H1B4 397 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 INTS9Q9NV88 658 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 SEC14L3Q9UDX4 400 aa17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 C19orf53Q9UNZ5 99 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-213ENST00000496785 TFECO14948 347 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 TO15178 435 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 ERN1O75460 977 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 G6PDP11413 515 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 SOX18P35713 384 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 TDGF1P3P51864 188 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 CLDN8P56748 225 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 GPR85P60893 370 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 PLCXD2Q0VAA5 305 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNF155Q12901 538 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 HSPB3Q12988 150 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 DUSP8Q13202 625 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 MLC1Q15049 377 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 CPTPQ5TA50 214 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 FHL5Q5TD97 284 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 OGFOD2Q6N063 350 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 ANKRD26P1Q6NSI1 321 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 OR2L13Q8N349 312 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 FBXW8Q8N3Y1 598 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 CPSF7Q8N684 471 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 OR2M7Q8NG81 312 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 ELP4Q96EB1 424 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 C7orf26Q96N11 449 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 C3orf14Q9HBI5 128 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 MARCOQ9UEW3 520 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 DTX4Q9Y2E6 619 aa17.74■□□□□ 0.43
CTDSP1-213ENST00000496785 ABCB7O75027 752 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 SASH3O75995 380 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 KITP10721 976 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 ABCD3P28288 659 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 UQCRFS1P47985 274 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 PLGLB1Q02325 96 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 MRPL49Q13405 166 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 PRSS53Q2L4Q9 553 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 LSM12Q3MHD2 195 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNF385BQ569K4 471 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 GFRALQ6UXV0 394 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 ZNF551Q7Z340 670 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 SPATA19Q7Z5L4 167 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 WDR75Q8IWA0 830 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 SLC34A3Q8N130 599 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 CEP70Q8NHQ1 597 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 CIDECQ96AQ7 238 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 VSTM2LQ96N03 204 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 GPR137Q96N19 417 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 DPY30Q9C005 99 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 BHLHE41Q9C0J9 482 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 FOLH1BQ9HBA9 442 aa17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 BOKQ9UMX3 212 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 GPR55Q9Y2T6 319 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-213ENST00000496785 A0A1W2PRB8 838 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 ANKRD33BA6NCL7 494 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 UPK1AO00322 258 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 SDHDO14521 159 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 PPM1BO75688 479 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 CCL3P10147 92 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 CLNS1AP54105 237 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 KCNJ2P63252 427 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 MRPS22P82650 360 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 PRR5P85299 388 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 NNATQ16517 81 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 DPY19L1Q2PZI1 675 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 VPS26BQ4G0F5 336 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 HSP90B2PQ58FF3 399 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 LARP4Q71RC2 724 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 NUP54Q7Z3B4 507 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 CAMKMTQ7Z624 323 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 SLC22A16Q86VW1 577 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 GHDCQ8N2G8 530 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 OR7A2PQ8NGA2 310 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 OR10G3Q8NGC4 313 aa17.72■□□□□ 0.43
CTDSP1-213ENST00000496785 DIO2Q92813 273 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms