RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MAP10Q9P2G4 905 aa20.2■□□□□ 0.82
C9orf3-222ENST00000496567 ANKRD11Q6UB99 2663 aaPredicted RBP20.2■□□□□ 0.82
C9orf3-222ENST00000496567 C2orf92A0A1B0GVN3 265 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 KRT75O95678 551 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 PRIM2P49643 509 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 DCAF7P61962 342 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 EBPQ15125 230 aaKnown RBP20.19■□□□□ 0.82
C9orf3-222ENST00000496567 ZNHIT3Q15649 155 aaPredicted RBP20.19■□□□□ 0.82
C9orf3-222ENST00000496567 TRMT5Q32P41 509 aaKnown RBP20.19■□□□□ 0.82
C9orf3-222ENST00000496567 DLEU7Q6UYE1 221 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 C6orf120Q7Z4R8 191 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 SLC5A8Q8N695 610 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 RCN3Q96D15 328 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 NEURL3Q96EH8 262 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 ARL8BQ9NVJ2 186 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 SLAMF8Q9P0V8 285 aa20.19■□□□□ 0.82
C9orf3-222ENST00000496567 FAF1Q9UNN5 650 aaPredicted RBP20.19■□□□□ 0.82
C9orf3-222ENST00000496567 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 TTC36A6NLP5 189 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 HMGN2P05204 90 aaKnown RBP20.18■□□□□ 0.82
C9orf3-222ENST00000496567 ZNF155Q12901 538 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-222ENST00000496567 SAXO2Q658L1 398 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 H3F3CQ6NXT2 135 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 CLEC4FQ8N1N0 589 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 CDRT4Q8N9R6 151 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 C17orf47Q8NEP4 570 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 BRIX1Q8TDN6 353 aaKnown RBP20.18■□□□□ 0.82
C9orf3-222ENST00000496567 ZFP90Q8TF47 636 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 GIMAP5Q96F15 307 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 GAL3ST4Q96RP7 486 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 WWTR1Q9GZV5 400 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 FOLH1BQ9HBA9 442 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 EQTNQ9NQ60 294 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 SLC6A13Q9NSD5 602 aa20.18■□□□□ 0.82
C9orf3-222ENST00000496567 A8MUI8 341 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 AIM2O14862 343 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 PRKNO60260 465 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 SOX30O94993 753 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 KRT16P08779 473 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 HOXB9P17482 250 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 PPIBP23284 216 aaKnown RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 CCL11P51671 97 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 MNAT1P51948 309 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 GTDC1Q4AE62 458 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 MFSD12Q6NUT3 480 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 BORAQ6PGQ7 559 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ANGPTL8Q6UXH0 198 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 TP53INP1Q96A56 240 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ROPN1LQ96C74 230 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 NSL1Q96IY1 281 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 SLC35G5Q96KT7 338 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 VSTM2LQ96N03 204 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ACTRT3Q9BYD9 372 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 EPS8L2Q9H6S3 715 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 TPT1P8Q9HAU6 139 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 IL1RL2Q9HB29 575 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 GPATCH2Q9NW75 528 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 VAPAQ9P0L0 249 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 TEKT2Q9UIF3 430 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 CCT8L1PA6NM43 557 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ESRRAP11474 423 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 PPICP45877 212 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ART3Q13508 389 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 LASP1Q14847 261 aaKnown RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 RPS19BP1Q86WX3 136 aaKnown RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 THAP3Q8WTV1 239 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 PSMF1Q92530 271 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ADIPOR1Q96A54 375 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 LRRC58Q96CX6 371 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 CGREF1Q99674 301 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 ITPAQ9BY32 194 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 RAD21L1Q9H4I0 556 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 SLC25A37Q9NYZ2 338 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 MYOTQ9UBF9 498 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-222ENST00000496567 DTX4Q9Y2E6 619 aa20.17■□□□□ 0.82
C9orf3-222ENST00000496567 TRBV5-3A0A0A0MS03 114 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 A6NL46 340 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 CLIC1O00299 241 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 MAGEA8P43361 318 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 TXNL4AP83876 142 aaKnown RBP20.16■□□□□ 0.82
C9orf3-222ENST00000496567 TCTN3Q6NUS6 607 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 MSRB3Q8IXL7 192 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 LGI4Q8N135 537 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 ARMC10Q8N2F6 343 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 SIRT6Q8N6T7 355 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 LCORQ96JN0 433 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-222ENST00000496567 ZNF354BQ96LW1 612 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 BTBD9Q96Q07 612 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 LMF2Q9BU23 707 aaKnown RBP20.16■□□□□ 0.82
C9orf3-222ENST00000496567 RYDENQ9NUL5 291 aaKnown RBP20.16■□□□□ 0.82
C9orf3-222ENST00000496567 CORO2BQ9UQ03 480 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 GMEB1Q9Y692 573 aa20.16■□□□□ 0.82
C9orf3-222ENST00000496567 EVPLLA8MZ36 301 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CBX6O95503 412 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 ITGB2P05107 769 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 DRD5P21918 477 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 MATN1P21941 496 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CALB2P22676 271 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 NUDT2P50583 147 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms