RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HOMEZQ8IX15 550 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 ADCY4Q8NFM4 1077 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 OR52R1Q8NGF1 315 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 C16orf78Q8WTQ4 265 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 RND1Q92730 232 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 HSPBAP1Q96EW2 488 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 APOPT1Q96IL0 206 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 METTL2AQ96IZ6 378 aaKnown RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 LCORQ96JN0 433 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 JSRP1Q96MG2 331 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 RILPQ96NA2 401 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 BTBD9Q96Q07 612 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 TRMOQ9BU70 441 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 EBPLQ9BY08 206 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 IQCGQ9H095 443 aaKnown RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 EXO5Q9H790 373 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 PNPLA3Q9NST1 481 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 BCAP29Q9UHQ4 241 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 WBP11Q9Y2W2 641 aaKnown RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 PCDHGB3Q9Y5G1 929 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 OTOGQ6ZRI0 2925 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CCDC168Q8NDH2 2452 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 FOXO6A8MYZ6 492 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 SLITRK5O94991 958 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ANXA4P09525 319 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 DDCP20711 480 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ENDOUP21128 410 aaKnown RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ELAVL4P26378 380 aaKnown RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 MASP1P48740 699 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 MRPS35P82673 323 aaKnown RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 NNATQ16517 81 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ERCC6LQ2NKX8 1250 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 GXYLT1Q4G148 440 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 SPDYAQ5MJ70 313 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 WLSQ5T9L3 541 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 TMEM198Q66K66 360 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 FAM111BQ6SJ93 734 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 PACS2Q86VP3 889 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 MCEMP1Q8IX19 187 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 FAM9CQ8IZT9 166 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 C4orf33Q8N1A6 199 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 EXOSC8Q96B26 276 aaKnown RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 TMEM41AQ96HV5 264 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ANGPTL4Q9BY76 406 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 STMN4Q9H169 189 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 UBQLN3Q9H347 655 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 MYNNQ9NPC7 610 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 RRAGDQ9NQL2 400 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-213ENST00000496347 SLC35C2Q9NQQ7 365 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 SENP1Q9P0U3 644 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 ACAD8Q9UKU7 415 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 C15orf41Q9Y2V0 281 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 HRH3Q9Y5N1 445 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 HCFC1P51610 2035 aa14.42□□□□□ -0.1
HDAC4-213ENST00000496347 FAM47E-STBD1D6RA91 191 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 NPIPB8E9PQR5 432 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 TO15178 435 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 LRATO95237 230 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 ABCB1P08183 1280 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-213ENST00000496347 HOXD4P09016 255 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-213ENST00000496347 RFPL3SP0C7P2 107 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 UROSP10746 265 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 NEFHP12036 1026 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 PRF1P14222 555 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 GABRA1P14867 456 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 DRD5P21918 477 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 PRPH2P23942 346 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 GDF1P27539 372 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 SOX18P35713 384 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 EMDP50402 254 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 VSNL1P62760 191 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 SNTA1Q13424 505 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 PCLAFQ15004 111 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 FAM180BQ6P0A1 224 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 B3GNT6Q6ZMB0 384 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 RNF165Q6ZSG1 346 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 LIX1Q8N485 282 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 ACBD4Q8NC06 268 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 NEIL3Q8TAT5 605 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 OMA1Q96E52 524 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 METTL7AQ9H8H3 244 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 MIEF1Q9NQG6 463 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 SPRR3Q9UBC9 169 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 LGALS13Q9UHV8 139 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 FAM215AQ9Y5M1 114 aa14.41□□□□□ -0.1
HDAC4-213ENST00000496347 PLOD3O60568 738 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 ABCB7O75027 752 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 COQ9O75208 318 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 NTSP30990 170 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 MPIP34949 423 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 CASP3P42574 277 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 PPICP45877 212 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 TRMT12Q53H54 448 aaKnown RBP14.4□□□□□ -0.1
HDAC4-213ENST00000496347 BICRALQ6AI39 1079 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 ZNF585AQ6P3V2 769 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 SCIMPQ6UWF3 145 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 TRABD2AQ86V40 505 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 PRR22Q8IZ63 422 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms