RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FLNAP21333 2647 aaKnown RBP20.14■□□□□ 0.82
HDDC3-203ENST00000494993 SNPHO15079 494 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 ERAL1O75616 437 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 ATP1B1P05026 303 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 KLK2P20151 261 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 CTSSP25774 331 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 FEN1P39748 380 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 NAGLUP54802 743 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 PPP2R2AP63151 447 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 EXOSC7Q15024 291 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 TSNAXIP1Q2TAA8 658 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 DESI1Q6ICB0 168 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 SLC30A6Q6NXT4 461 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 NUP54Q7Z3B4 507 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 YRDCQ86U90 279 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 KIF18BQ86Y91 864 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 MMP21Q8N119 569 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 SLC44A1Q8WWI5 657 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 OMA1Q96E52 524 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 POM121Q96HA1 1249 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 LCORQ96JN0 433 aaPredicted RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 NODALQ96S42 347 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 OSBPL11Q9BXB4 747 aa20.14■□□□□ 0.81
HDDC3-203ENST00000494993 FARSBQ9NSD9 589 aaKnown RBP20.14■□□□□ 0.81
HDDC3-203ENST00000494993 VPS13CQ709C8 3753 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 A0A1B0GTL3 188 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 ACOX3O15254 700 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 ACTL6AO96019 429 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 INHBAP08476 426 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 RPS17P08708 135 aaKnown RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 RHOXF2BP0C7M4 288 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 CSNK2A2P19784 350 aaPredicted RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 OPRM1P35372 400 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 SOX18P35713 384 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 PTGDSP41222 190 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 AGFG1P52594 562 aaKnown RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 PLCXD2Q0VAA5 305 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 GALNT1Q10472 559 aaPredicted RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 RCAN2Q14206 197 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 RPS27LQ71UM5 84 aaKnown RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 C17orf53Q8N3J3 647 aaPredicted RBP20.13■□□□□ 0.81
HDDC3-203ENST00000494993 ALPK1Q96QP1 1244 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 LRRC1Q9BTT6 524 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 FUT8Q9BYC5 575 aa20.13■□□□□ 0.81
HDDC3-203ENST00000494993 TUBAL3A6NHL2 446 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 EEF1E1-BLOC1S5C9J1V9 151 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 EEF1E1O43324 174 aaKnown RBP20.12■□□□□ 0.81
HDDC3-203ENST00000494993 ICOSLGO75144 302 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 CBX7O95931 251 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 IL18BPO95998 194 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 PDYNP01213 254 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 EPXP11678 715 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 COL6A2P12110 1019 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 SORDQ00796 357 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 DUSP2Q05923 314 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 SNTA1Q13424 505 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 LETMD1Q6P1Q0 360 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 PAMR1Q6UXH9 720 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 RELL1Q8IUW5 271 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 C9orf106Q8NAJ2 232 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 SIMC1Q8NDZ2 872 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 ADCY4Q8NFM4 1077 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 ZPLD1Q8TCW7 415 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 ZNF483Q8TF39 744 aaPredicted RBP20.12■□□□□ 0.81
HDDC3-203ENST00000494993 SELENOMQ8WWX9 145 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 TM4SF18Q96CE8 201 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 CTHRC1Q96CG8 243 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 KLHL29Q96CT2 875 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 BRF2Q9HAW0 419 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 GALNT9Q9HCQ5 603 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 KLRF1Q9NZS2 232 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 JKAMPQ9P055 326 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 PSME2Q9UL46 239 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 PLLPQ9Y342 182 aa20.12■□□□□ 0.81
HDDC3-203ENST00000494993 NIPBLQ6KC79 2804 aaeCLIP20.12■□□□□ 0.81
HDDC3-203ENST00000494993 C2orf72A6NCS6 295 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 PPP6CO00743 305 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 UGT2B11O75310 529 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 OTCP00480 354 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 TMIGD3P0DMS9 266 aaPredicted RBP20.11■□□□□ 0.81
HDDC3-203ENST00000494993 CYP4B1P13584 511 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 GCKP35557 465 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 SERPINB9P50453 376 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 DGKQP52824 942 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 DCAF7P61962 342 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
HDDC3-203ENST00000494993 TAOK1Q7L7X3 1001 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 CAMKMTQ7Z624 323 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 OR52R1Q8NGF1 315 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 MBD6Q96DN6 1003 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 PAFAH2Q99487 392 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 MRPL57Q9BQC6 102 aaKnown RBP20.11■□□□□ 0.81
HDDC3-203ENST00000494993 CDC42EP4Q9H3Q1 356 aaKnown RBP20.11■□□□□ 0.81
HDDC3-203ENST00000494993 EHD3Q9NZN3 535 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 PRODH2Q9UF12 536 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 SNX6Q9UNH7 406 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 MAPRE3Q9UPY8 281 aa20.11■□□□□ 0.81
HDDC3-203ENST00000494993 EXO1Q9UQ84 846 aaKnown RBP20.11■□□□□ 0.81
HDDC3-203ENST00000494993 PRAMEF25A6NGN4 478 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms