RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 JADE3Q92613 823 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 ADIPOR1Q96A54 375 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 MTERF3Q96E29 417 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 TMEM120AQ9BXJ8 343 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 ATAD3AQ9NVI7 634 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.28□□□□□ -0.76
APTX-230ENST00000494649 PCDHGB7Q9Y5F8 929 aa10.28□□□□□ -0.76
APTX-230ENST00000494649 B8ZZF3 427 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 SLC28A2O43868 658 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 NADKO95544 446 aaPredicted RBP10.27□□□□□ -0.76
APTX-230ENST00000494649 IDO1P14902 403 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 KIR3DL1P43629 444 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 WNT3P56703 355 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 FBXW4P57775 412 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 HBA1P69905 142 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 SPDYE7PQ495Y7 208 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 ZNF766Q5HY98 468 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 PRAMEF20Q5VT98 475 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 DNAJC14Q6Y2X3 702 aaPredicted RBP10.27□□□□□ -0.76
APTX-230ENST00000494649 C7orf57Q8NEG2 295 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 OR7G1Q8NGA0 311 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 OR8K3Q8NH51 312 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 ZFP28Q8NHY6 868 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 VPS33AQ96AX1 596 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 COQ8BQ96D53 544 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 CHMP6Q96FZ7 201 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 TSPAN10Q9H1Z9 355 aaPredicted RBP10.27□□□□□ -0.76
APTX-230ENST00000494649 CLMPQ9H6B4 373 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 CXorf36Q9H7Y0 433 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 FOLH1BQ9HBA9 442 aa10.27□□□□□ -0.76
APTX-230ENST00000494649 SIRT3Q9NTG7 399 aaPredicted RBP10.27□□□□□ -0.76
APTX-230ENST00000494649 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 A0A0G2JMM0 328 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 A0A1W2PPB8 328 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 A0A1W2PRS3 328 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 OR6C76A6NM76 312 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 KIR3DP1A8MWS1 328 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 SUV39H1O43463 412 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 PLOD3O60568 738 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 ERN1O75460 977 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 SLC22A3O75751 556 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 TGDSO95455 350 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 S100A3P33764 101 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 RPL3P39023 403 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 FRKP42685 505 aaPredicted RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 HLCSP50747 726 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 RPS26P62854 115 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 TP53BP2Q13625 1128 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 BICRALQ6AI39 1079 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 NPSR1Q6W5P4 371 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 OR2L13Q8N349 312 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 MDS2Q8NDY4 140 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 NUP43Q8NFH3 380 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 OR10G3Q8NGC4 313 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 OR4A15Q8NGL6 344 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 SLC9A6Q92581 669 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 FAM120BQ96EK7 910 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 C16orf58Q96GQ5 468 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 BHLHE41Q9C0J9 482 aaPredicted RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 ZCCHC3Q9NUD5 404 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 TAS2R9Q9NYW1 312 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 NTNG1Q9Y2I2 539 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 COPG1Q9Y678 874 aaKnown RBP10.27□□□□□ -0.77
APTX-230ENST00000494649 ZNF462Q96JM2 2506 aa10.27□□□□□ -0.77
APTX-230ENST00000494649 TRAV17A0A0B4J275 112 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 TBX19O60806 448 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 WISP2O76076 250 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 SORBS2O94875 1100 aaKnown RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 GSNP06396 782 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 CCL3P10147 92 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 ABCD3P28288 659 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 TLE1Q04724 770 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 IGFBP7Q16270 282 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 TIGD2Q4W5G0 525 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 SLC44A2Q8IWA5 706 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 LGI4Q8N135 537 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 MIER2Q8N344 545 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 CPSF7Q8N684 471 aaKnown RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 ZNF441Q8N8Z8 693 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 PIK3R3Q92569 461 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 TMBIM1Q969X1 311 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 TMEM125Q96AQ2 219 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 EFHD2Q96C19 240 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 SNRNP40Q96DI7 357 aaKnown RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 C5orf34Q96MH7 638 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 VSTM2LQ96N03 204 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 OR52E6Q96RD3 313 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 INPP5KQ9BT40 448 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 SDR39U1Q9NRG7 319 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 ACSS1Q9NUB1 689 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 ASF1BQ9NVP2 202 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 PRODH2Q9UF12 536 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 ANAPC2Q9UJX6 822 aa10.26□□□□□ -0.77
APTX-230ENST00000494649 C19orf53Q9UNZ5 99 aaPredicted RBP10.26□□□□□ -0.77
APTX-230ENST00000494649 PLOD2O00469 737 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms