RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 SRSF5Q13243 272 aaKnown RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 CDH18Q13634 790 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 MTF1Q14872 753 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TMEM132DQ14C87 1099 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TAB1Q15750 504 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 SNAI3Q3KNW1 292 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 AGKQ53H12 422 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 CMPK2Q5EBM0 449 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ARMCX4Q5H9R4 360 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 RABGAP1LQ5R372 815 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ARMC12Q5T9G4 340 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 AADACL4Q5VUY2 407 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TTC23Q5W5X9 447 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 FUT10Q6P4F1 479 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 SLC39A4Q6P5W5 647 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 FCRLAQ7L513 359 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 BNIPLQ7Z465 357 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 NANOGNBQ7Z5D8 188 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 YRDCQ86U90 279 aaKnown RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 FAM228AQ86W67 206 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 FAM131BQ86XD5 332 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ZNF444Q8N0Y2 327 aaPredicted RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 GPC2Q8N158 579 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 LRRC75A-AS1Q8N1F1 130 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TMEM99Q8N816 258 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 FAM184AQ8NB25 1140 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 DRAXINQ8NBI3 349 aaPredicted RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 COLGALT1Q8NBJ5 622 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TRPV3Q8NET8 790 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ZNF397Q8NF99 534 aaPredicted RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 NUP37Q8NFH4 326 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 RAB3IL1Q8TBN0 382 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 UBTD2Q8WUN7 234 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 GTF3AQ92664 365 aaKnown RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 RAB39BQ96DA2 213 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 RAB40CQ96S21 281 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 NDNQ99608 321 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 RHOXF2Q9BQY4 288 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 MTG1Q9BT17 334 aaPredicted RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 WRAP53Q9BUR4 548 aaKnown RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 NUSAP1Q9BXS6 441 aaKnown RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 PKIBQ9C010 78 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 C10orf88Q9H8K7 445 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 MED20Q9H944 212 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 APMAPQ9HDC9 416 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 SPHK2Q9NRA0 654 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 AGPAT5Q9NUQ2 364 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ETNK2Q9NVF9 386 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 CRLS1Q9UJA2 301 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ELF5Q9UKW6 265 aaPredicted RBP2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ERVK-19Q9WJR5 959 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ATG4BQ9Y4P1 393 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 CSNK1G3Q9Y6M4 447 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 KIAA1217Q5T5P2 1943 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 ZMYM6O95789 1325 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 IL16Q14005 1332 aa2.68□□□□□ -1.98
CLHC1-213ENST00000494539 TRBV4-1A0A0J9YWV2 114 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 RNF222A6NCQ9 220 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 HELTA6NFD8 242 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 WASH3PC4AMC7 463 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 PPIAL4DF5H284 164 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CHEK1O14757 476 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 ARPC1BO15143 372 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 RNF113AO15541 343 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 LRRTM2O43300 516 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 ZNF208O43345 1280 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 GRAP2O75791 330 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 AGTP01019 485 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CHRNA1P02708 482 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 MT-ND1P03886 318 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CSF2P04141 144 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CT45A8P0DMV1 189 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CT45A9P0DMV2 189 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 F3P13726 295 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CD59P13987 128 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 ANPEPP15144 967 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 NCF2P19878 526 aaPredicted RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 SHC1P29353 583 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 STIP1P31948 543 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 SFTPDP35247 375 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 TRIM23P36406 574 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 DLSTP36957 453 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 OR3A3P47888 321 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 OR1G1P47890 313 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CEBPDP49716 269 aaPredicted RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 PPT1P50897 306 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CLCN4P51793 760 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 GEMP55040 296 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 RPS8P62241 208 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 MS4A2Q01362 244 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CNTN2Q02246 1040 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 SRSF9Q13242 221 aaKnown RBP eCLIP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 SELPLGQ14242 412 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 FASTKD3Q14CZ7 662 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 ZNF239Q16600 458 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 MTHFSDQ2M296 383 aaKnown RBP2.67□□□□□ -1.98
CLHC1-213ENST00000494539 EXOC3L2Q2M3D2 409 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 ZNF528Q3MIS6 628 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 GPAT3Q53EU6 434 aa2.67□□□□□ -1.98
CLHC1-213ENST00000494539 CT45A2Q5DJT8 189 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms