RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 SLC38A3Q99624 504 aa6.69□□□□□ -1.34
EPHA3-203ENST00000494014 THAP7Q9BT49 309 aaPredicted RBP6.69□□□□□ -1.34
EPHA3-203ENST00000494014 TMPRSS13Q9BYE2 586 aa6.69□□□□□ -1.34
EPHA3-203ENST00000494014 NKX6-2Q9C056 277 aaPredicted RBP6.69□□□□□ -1.34
EPHA3-203ENST00000494014 MRPL17Q9NRX2 175 aaKnown RBP6.69□□□□□ -1.34
EPHA3-203ENST00000494014 EXTL2Q9UBQ6 330 aa6.69□□□□□ -1.34
EPHA3-203ENST00000494014 EDARQ9UNE0 448 aa6.69□□□□□ -1.34
EPHA3-203ENST00000494014 SF3B6Q9Y3B4 125 aaKnown RBP6.69□□□□□ -1.34
EPHA3-203ENST00000494014 MAGEB17A8MXT2 336 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 FPGTO14772 594 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SSNA1O43805 119 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ATXN1LP0C7T5 689 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HNMTP50135 292 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HMGA2P52926 109 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 WNT4P56705 351 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 STARD6P59095 220 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HMGCS1Q01581 520 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SRSF11Q05519 484 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ITKQ08881 620 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 RBBP4Q09028 425 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MTAPQ13126 283 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZBTB6Q15916 424 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 C9orf57Q5W0N0 161 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SLC27A1Q6PCB7 646 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZER1Q7Z7L7 766 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ANKRD46Q86W74 232 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 LRRC28Q86X40 367 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 OR8J1Q8NGP2 316 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZNF707Q96C28 371 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PANX1Q96RD7 426 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZNF251Q9BRH9 671 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 YIPF4Q9BSR8 244 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SPATA5L1Q9BVQ7 753 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ABCG4Q9H172 646 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 NT5MQ9NPB1 228 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ENAMQ9NRM1 1142 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZNF624Q9P2J8 865 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PIN4Q9Y237 131 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 KCTD3Q9Y597 815 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TMEM82A0PJX8 343 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 LGALS8O00214 317 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MANBAO00462 879 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PRMT3O60678 531 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PRAF2O60831 178 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 CBX7O95931 251 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 S100A8P05109 93 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 S100A9P06702 114 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HIST1H2AGP0C0S8 130 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 EBLN1P0CF75 366 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HAPLN1P10915 354 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SRFP11831 508 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 BTF3P20290 206 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HIST1H2ADP20671 130 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 RBMS1P29558 406 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ACSL1P33121 698 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 CTBP2P56545 445 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SWI5Q1ZZU3 235 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 GSG1Q2KHT4 349 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HFEQ30201 348 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 Q3ZCU0 254 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MARC1Q5VT66 337 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HIST2H2AA3Q6FI13 130 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 CASP12Q6UXS9 341 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 IKBIPQ70UQ0 350 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 BTN2A1Q7KYR7 527 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PRICKLE2Q7Z3G6 844 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TSEN54Q7Z6J9 526 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TADA1Q96BN2 335 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 LRRC46Q96FV0 321 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 CDKN2AIPNLQ96HQ2 116 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HIST1H2AHQ96KK5 128 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 OR4K3Q96R72 315 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 HIST1H2AJQ99878 128 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TREX2Q9BQ50 279 aaPredicted RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MED10Q9BTT4 135 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 PDCD10Q9BUL8 212 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TSSK6Q9BXA6 273 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 NMUR1Q9HB89 426 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 FAM120CQ9NX05 1096 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ZMYM5Q9UJ78 669 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 FBXL2Q9UKC9 423 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 UBQLN1Q9UMX0 589 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 RAI2Q9Y5P3 530 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 LOC105369274A0A096LPK9 316 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 TMEM129A0AVI4 362 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 G3V3Q6 166 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SMAD6O43541 496 aaKnown RBP6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ITGA10O75578 1167 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 RP2O75695 350 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 SOD1P00441 154 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 ADAP00813 363 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 URODP06132 367 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 MMP2P08253 660 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 DRD2P14416 443 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 JUPP14923 745 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 RFX3P48380 749 aa6.68□□□□□ -1.34
EPHA3-203ENST00000494014 GDI2P50395 445 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms