RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TP53TG5Q9Y2B4 290 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 A0A1B0GVC2 190 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 IQCMA0A1B0GVH7 501 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GLTPD2A6NH11 291 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 A6NIN4 97 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OR2AT4A6NND4 320 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TIMP2P16035 220 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 DAPP51397 102 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CDK6Q00534 326 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TNFRSF9Q07011 255 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SREBF2Q12772 1141 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF177Q13360 481 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 HLXQ14774 488 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NKG7Q16617 165 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PTRHD1Q6GMV3 140 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 C11orf88Q6PI97 169 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GPR149Q86SP6 731 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 HDDC3Q8N4P3 179 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NETO2Q8NC67 525 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 RPLP0P6Q8NHW5 317 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 C9orf43Q8TAL5 461 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NPRL2Q8WTW4 380 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SLC38A1Q9H2H9 487 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MTG2Q9H4K7 406 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PRM3Q9NNZ6 103 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TNFRSF12AQ9NP84 129 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 B3GAT2Q9NPZ5 323 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PLEKHM1Q9Y4G2 1056 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GPR45Q9Y5Y3 372 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 LTBP2Q14767 1821 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MEIKINA0A087WXM9 373 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 A0A1W2PPE3 182 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ELOVL7A1L3X0 281 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OR14I1A6ND48 311 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 C3orf70A6NLC5 250 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 AOC2O75106 756 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GRAP2O75791 330 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OTCP00480 354 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SNRPCP09234 159 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ODC1P11926 461 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CXCL2P19875 107 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 STAT5AP42229 794 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NPBWR1P48145 328 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SELENOPP49908 381 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ATP4BP51164 291 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 JAK3P52333 1124 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 AGFG1P52594 562 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PKIAP61925 76 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 UFM1P61960 85 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 FOXO1Q12778 655 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GAMTQ14353 236 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MELKQ14680 651 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PDZD11Q5EBL8 140 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 C1orf185Q5T7R7 199 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MZT2AQ6P582 158 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 UNQ6494/PRO21346Q6UXR6 183 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MBOAT1Q6ZNC8 495 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF534Q76KX8 674 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CDK20Q8IZL9 346 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 OR2T11Q8NH01 316 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TWIST2Q8WVJ9 160 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 HGDQ93099 445 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 KIAA1143Q96AT1 154 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 KCTD7Q96MP8 289 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PINK1Q9BXM7 581 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 POLDIP3Q9BY77 421 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PARD6GQ9BYG4 376 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ARHGAP39Q9C0H5 1083 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ACTL8Q9H568 366 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CCDC86Q9H6F5 360 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ELP3Q9H9T3 547 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MTMR10Q9NXD2 777 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TEX10Q9NXF1 929 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SLCO1C1Q9NYB5 712 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 KLHL9Q9P2J3 617 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF629Q9UEG4 869 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ACSL6Q9UKU0 697 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GSTK1Q9Y2Q3 226 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 VWA8A3KMH1 1905 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MYO16Q9Y6X6 1858 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MEX3AA1L020 520 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 WASH4PA8MWX3 477 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF670-ZNF695F2Z2N8 137 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 PHOX2AO14813 284 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MBTPS2O43462 519 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 ANXA9O76027 345 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 C6orf47O95873 294 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 TCRBP04435 133 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 C5AR1P21730 350 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms