RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 THOC3Q96J01 351 aaKnown RBP10.73□□□□□ -0.69
LSM2-214ENST00000493387 ZNF354BQ96LW1 612 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 CGREF1Q99674 301 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 TRIM4Q9C037 500 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 ARL8BQ9NVJ2 186 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 THUMPD1Q9NXG2 353 aaKnown RBP10.73□□□□□ -0.69
LSM2-214ENST00000493387 GIN1Q9NXP7 522 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 NDE1Q9NXR1 346 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 MAP10Q9P2G4 905 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.73□□□□□ -0.69
LSM2-214ENST00000493387 ERVK-11Q9UQG0 969 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 AP3M1Q9Y2T2 418 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 PCDHB14Q9Y5E9 798 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 PCDHGB3Q9Y5G1 929 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 HEMK1Q9Y5R4 338 aaPredicted RBP10.73□□□□□ -0.69
LSM2-214ENST00000493387 KCNMB2Q9Y691 235 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 DCHS1Q96JQ0 3298 aa10.73□□□□□ -0.69
LSM2-214ENST00000493387 SPEGQ15772 3267 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 C15orf38-AP3S2A0A0A6YYH1 394 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 CLIC1O00299 241 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 AIM2O14862 343 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ACOX3O15254 700 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 AGR2O95994 175 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ITGB2P05107 769 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 HMGN2P05204 90 aaKnown RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 GSNP06396 782 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ALOX5P09917 674 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ITGAMP11215 1152 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 DRD5P21918 477 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 CALB2P22676 271 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 PTPN6P29350 595 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 CDKN2CP42773 168 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 GABPB1Q06547 395 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 Q0VFX4 171 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ZNF155Q12901 538 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 EBPQ15125 230 aaKnown RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 CRB2Q5IJ48 1285 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 MFSD12Q6NUT3 480 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 CDC73Q6P1J9 531 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 DNAJC14Q6Y2X3 702 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 ARPINQ7Z6K5 226 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 RPS19BP1Q86WX3 136 aaKnown RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 TAGAPQ8N103 731 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ARMC10Q8N2F6 343 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 GALNT16Q8N428 558 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 SLC15A4Q8N697 577 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ZNF321PQ8N8H1 164 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 OR5AK3PQ8NH89 298 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 MIPOL1Q8TD10 442 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ZFP90Q8TF47 636 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 HOXB13Q92826 284 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 LRRC58Q96CX6 371 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 RCN3Q96D15 328 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 HSPBAP1Q96EW2 488 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 SLC35G5Q96KT7 338 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 VSTM2LQ96N03 204 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 STACQ99469 402 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 NPAS2Q99743 824 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 LMF2Q9BU23 707 aaKnown RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 WWTR1Q9GZV5 400 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 EPS8L2Q9H6S3 715 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 FOLH1BQ9HBA9 442 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 CPNE5Q9HCH3 593 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 GPATCH2Q9NW75 528 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ABI3Q9P2A4 366 aa10.72□□□□□ -0.69
LSM2-214ENST00000493387 ZNF223Q9UK11 482 aaPredicted RBP10.72□□□□□ -0.69
LSM2-214ENST00000493387 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 TRBV5-3A0A0A0MS03 114 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 FRG2CA6NGY1 282 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 A8MUI8 341 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 EBAG9O00559 213 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 ASNA1O43681 348 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 HNRNPCL1O60812 293 aaKnown RBP10.71□□□□□ -0.69
LSM2-214ENST00000493387 ATP5HO75947 161 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 ALPPP05187 535 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 HOXB9P17482 250 aaPredicted RBP10.71□□□□□ -0.69
LSM2-214ENST00000493387 MATN1P21941 496 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 KHKP50053 298 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 CCL11P51671 97 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 NRG3P56975 720 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 MLF1P58340 268 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 CXADRP78310 365 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 FADDQ13158 208 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 DUSP8Q13202 625 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 GAB1Q13480 694 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 LASP1Q14847 261 aaKnown RBP10.71□□□□□ -0.69
LSM2-214ENST00000493387 MEP1AQ16819 746 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 CYP27C1Q4G0S4 372 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 RUNDC3AQ59EK9 446 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 PIGGQ5H8A4 983 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 AGAP7PQ5VUJ5 663 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 BORAQ6PGQ7 559 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 ANGPTL8Q6UXH0 198 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 DND1Q8IYX4 353 aaKnown RBP10.71□□□□□ -0.69
LSM2-214ENST00000493387 KIF2BQ8N4N8 673 aa10.71□□□□□ -0.69
LSM2-214ENST00000493387 ZNF441Q8N8Z8 693 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms