RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FARSBQ9NSD9 589 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 GIMAP4Q9NUV9 329 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 MAT2BQ9NZL9 334 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 DCDC2Q9UHG0 476 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 UTS2RQ9UKP6 389 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 L3MBTL1Q9Y468 752 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 OR6C70A6NIJ9 312 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 MANBAO00462 879 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 TO15178 435 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 OR4F21O95013 312 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ENO1P06733 434 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ECHS1P30084 290 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 HMOX2P30519 316 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 MPIP34949 423 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 OPRM1P35372 400 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 KRT20P35900 424 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ALDH9A1P49189 494 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ASCL1P50553 236 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 PKNOX1P55347 436 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 MRPS22P82650 360 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 PLCXD2Q0VAA5 305 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 RCAN2Q14206 197 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 FBXL19-AS1Q494R0 122 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ACSF3Q4G176 576 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 NSUN5P2Q63ZY6 315 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ENPP6Q6UWR7 440 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 GPRIN3Q6ZVF9 776 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 KIF18BQ86Y91 864 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 C1orf52Q8N6N3 182 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 CDYL2Q8N8U2 506 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF675Q8TD23 568 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 NINJ1Q92982 152 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ABTB1Q969K4 478 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 NTNG2Q96CW9 530 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 OMA1Q96E52 524 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF681Q96N22 645 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 KLRF1Q9NZS2 232 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 EXO1Q9UQ84 846 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 CAMK2AQ9UQM7 478 aa11.39□□□□□ -0.59
COL6A1-205ENST00000492851 WBP11Q9Y2W2 641 aaKnown RBP11.39□□□□□ -0.59
COL6A1-205ENST00000492851 ADGRG4Q8IZF6 3080 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 GNG14A0A1W2PPG7 69 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 A0A1W2PS29 197 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 SERTM1A2A2V5 107 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PPP6CO00743 305 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ICOSLGO75144 302 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 SLITRK5O94991 958 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 LRATO95237 230 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 IL18BPO95998 194 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 SBK3P0C264 359 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 CPN1P15169 458 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 BMP7P18075 431 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 TSPAN8P19075 237 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 BMP5P22003 454 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PTPN6P29350 595 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 UQCRC1P31930 480 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PRKAA2P54646 552 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ACSM2AQ08AH3 577 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 LCP2Q13094 533 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 EFR3AQ14156 821 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ERCC6LQ2NKX8 1250 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 UBAP2Q5T6F2 1119 aaKnown RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 FNDC7Q5VTL7 733 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ACSM2BQ68CK6 577 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 GALNT18Q6P9A2 607 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 FAM111BQ6SJ93 734 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ANGPTL8Q6UXH0 198 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PRR22Q8IZ63 422 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 OR52R1Q8NGF1 315 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 CNRIP1Q96F85 164 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 COL21A1Q96P44 957 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 OSBPL11Q9BXB4 747 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ITPAQ9BY32 194 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PFDN4Q9NQP4 134 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 SIRT5Q9NXA8 310 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 DNAJB12Q9NXW2 375 aaKnown RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 TMEM216Q9P0N5 145 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF225Q9UK10 706 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 DLGAP4Q9Y2H0 992 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 GPR55Q9Y2T6 319 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PLLPQ9Y342 182 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
COL6A1-205ENST00000492851 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 A0A1B0GTL3 188 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 GNB5O14775 395 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SNPHO15079 494 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 RIPK2O43353 540 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms