RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 EPHX4Q8IUS5 362 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 IQCF2Q8IXL9 164 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 MMP21Q8N119 569 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LRRC25Q8N386 305 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SIRT6Q8N6T7 355 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NUP43Q8NFH3 380 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 C10orf82Q8WW14 230 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LOXL4Q96JB6 756 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 OR2A14Q96R47 310 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SERINC2Q96SA4 455 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TOR3AQ9H497 397 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 LDAHQ9H6V9 325 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 TPT1P8Q9HAU6 139 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SLC6A20Q9NP91 592 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SPAG4Q9NPE6 437 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SLC35C2Q9NQQ7 365 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 PTGFRNQ9P2B2 879 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 RABL2AQ9UBK7 228 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 NKX1-2Q9UD57 310 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-215ENST00000492417 POMT2Q9UKY4 750 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SLC9A8Q9Y2E8 581 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 ATG4BQ9Y4P1 393 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 N6AMT1Q9Y5N5 214 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 GMPPBQ9Y5P6 360 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 SCN2AQ99250 2005 aa4.23□□□□□ -1.73
TRA2B-215ENST00000492417 A0A0G2JPF8 293 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 FAM234BA2RU67 622 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 LILRA5A6NI73 299 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 HNRNPCL3B7ZW38 293 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 D6RAR5 112 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 J3QRK9 145 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 AP3D1O14617 1153 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 FOXD2O60548 495 aaPredicted RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SERPINB7O75635 380 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 TIPRLO75663 272 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SLC25A12O75746 678 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 OR6A2O95222 327 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 HNRNPCL4P0DMR1 293 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SDC1P18827 310 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 MATN1P21941 496 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 ATP5A1P25705 553 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 TEAD1P28347 426 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 MC3RP41968 323 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 GPR3P46089 330 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 BTG2P78543 158 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 LIPEQ05469 1076 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PPP1R8Q12972 351 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 TGIF1Q15583 401 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 CSRP2Q16527 193 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DEFB109BQ30KR1 87 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PAPD4Q6PIY7 484 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 C6orf89Q6UWU4 347 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 EIF3MQ7L2H7 374 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PRSS41Q7RTY9 318 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 OR52J3Q8NH60 311 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 STT3BQ8TCJ2 826 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 MZB1Q8WU39 189 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 HDAC2Q92769 488 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DIO2Q92813 273 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DMRTB1Q96MA1 342 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SORT1Q99523 831 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 TAS2R9Q9NYW1 312 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 MRPS7Q9Y2R9 242 aaKnown RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PCDHGB3Q9Y5G1 929 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 C5orf42Q9H799 3197 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SPTBN4Q9H254 2564 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 NPIPA5A0A0B4J1W7 369 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 A0A1B0GX78 115 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 NPIPA7E9PJI5 369 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 H3BSA7 217 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 MYL12BO14950 172 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SSNA1O43805 119 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 AIFM1O95831 613 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DHFRP00374 187 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 TSPAN19P0C672 248 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 NPIPA8P0DM63 369 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 NOS3P29474 1203 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 AHRP35869 848 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PIK3CBP42338 1070 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 ARG2P78540 354 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PLCXD2Q0VAA5 305 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DECR1Q16698 335 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PYDC2Q56P42 97 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 RUNDC3AQ59EK9 446 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 CDKL4Q5MAI5 379 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 DDI2Q5TDH0 399 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 METTL21CQ5VZV1 264 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 KANK2Q63ZY3 851 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 GLYATQ6IB77 296 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 ZNF544Q6NX49 715 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 IL20RBQ6UXL0 311 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 SPPL2CQ8IUH8 684 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 UBQLNLQ8IYU4 475 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 LSMEM2Q8N112 164 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 GLB1L3Q8NCI6 653 aaPredicted RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 C11orf65Q8NCR3 313 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 PIK3C3Q8NEB9 887 aa4.22□□□□□ -1.73
TRA2B-215ENST00000492417 NLGN4YQ8NFZ3 816 aaPredicted RBP4.22□□□□□ -1.73
TRA2B-215ENST00000492417 OR1L3Q8NH93 324 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms