RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MBD3L3A6NE82 208 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 GOLGA6L10A6NI86 522 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 MBD3L5A6NJ08 208 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CD8B2A6NJW9 211 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM90A27PA6NNH2 459 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 POC1B-GALNT4F8VUJ3 575 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 RIPK2O43353 540 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CTAG2O75638 210 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 OR4F21O95013 312 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CTAGE8P0CG41 777 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CPN1P15169 458 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CHN1P15882 459 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 ATP5F1P24539 256 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 PEX19P40855 299 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 NRG3P56975 720 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 DCAF7P61962 342 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 PSPHP78330 225 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 RPP38P78345 283 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CSTF3Q12996 717 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 DAZAP2Q15038 168 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 RASA2Q15283 850 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 TRMT12Q53H54 448 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF628Q5EBL2 1059 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 SGO1Q5FBB7 561 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CES4AQ5XG92 561 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 HLA-DQA1Q5Y7H0 255 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 NSUN5P2Q63ZY6 315 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 TTC19Q6DKK2 380 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 LACC1Q8IV20 430 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CTAGE4Q8IX94 777 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 C1orf52Q8N6N3 182 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 GBP7Q8N8V2 638 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 WDSUB1Q8N9V3 476 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 RELL2Q8NC24 303 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 OR10Q1Q8NGQ4 319 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 MBD3L2Q8NHZ7 208 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 ZPLD1Q8TCW7 415 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 ACMSDQ8TDX5 336 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 SELENOMQ8WWX9 145 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC35A4Q96G79 324 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 WDYHV1Q96HA8 205 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 LCORQ96JN0 433 aaPredicted RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 BTBD9Q96Q07 612 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM237Q96Q45 408 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 SHCBP1LQ9BZQ2 653 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 CALHM2Q9HA72 323 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 JKAMPQ9P055 326 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 PSME2Q9UL46 239 aa7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 EXO1Q9UQ84 846 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 MRPS18CQ9Y3D5 142 aaKnown RBP7.65□□□□□ -1.18
SMARCB1-207ENST00000491967 FRG2CA6NGY1 282 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 OR6C70A6NIJ9 312 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 KDM4EB2RXH2 506 aaPredicted RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 NPIPB8E9PQR5 432 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 SNPHO15079 494 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 PLOD3O60568 738 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ICOSLGO75144 302 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ULK1O75385 1050 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 BCAS2O75934 225 aaPredicted RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 LRATO95237 230 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ESRRBO95718 433 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 IL18BPO95998 194 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ACTL6AO96019 429 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 KRT6AP02538 564 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 KRT6BP04259 564 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ENO1P06733 434 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 GSTA1P08263 222 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 CT45A8P0DMV1 189 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 CT45A9P0DMV2 189 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 BMP7P18075 431 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 TSPAN8P19075 237 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 NT5EP21589 574 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 GDF1P27539 372 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 FEN1P39748 380 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 GSTM5P46439 218 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 KRT6CP48668 564 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 TRPC1P48995 793 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF136P52737 540 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 NAGLUP54802 743 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 PKNOX1P55347 436 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 EXOSC7Q15024 291 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 SF3B4Q15427 424 aaKnown RBP eCLIP7.64□□□□□ -1.193e-7■■□□□ 13
SMARCB1-207ENST00000491967 CT45A2Q5DJT8 189 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 TCHHL1Q5QJ38 904 aaPredicted RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 FAM219BQ5XKK7 198 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 DESI1Q6ICB0 168 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ARSKQ6UWY0 536 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 SLC22A9Q8IVM8 553 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 PM20D2Q8IYS1 436 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 SAMD14Q8IZD0 417 aaPredicted RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 CDYL2Q8N8U2 506 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 EIF1ADQ8N9N8 165 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 TNIP2Q8NFZ5 429 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 OMA1Q96E52 524 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 NODALQ96S42 347 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF559Q9BR84 538 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 FAIM2Q9BWQ8 316 aa7.64□□□□□ -1.19
SMARCB1-207ENST00000491967 ITPAQ9BY32 194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms