RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ZNF639Q9UID6 485 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 FBXL2Q9UKC9 423 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 BOKQ9UMX3 212 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 C15orf41Q9Y2V0 281 aa8.13□□□□□ -1.11
HDAC3-211ENST00000491581 TNPO3Q9Y5L0 923 aaKnown RBP8.13□□□□□ -1.11
HDAC3-211ENST00000491581 A0A087WUV0 522 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 H0YC42 278 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 RIPK2O43353 540 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 DYRK3O43781 588 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ICOSLGO75144 302 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 PPM1BO75688 479 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ESRRBO95718 433 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 MASP1P48740 699 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 CDK9P50750 372 aaKnown RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ART1P52961 327 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 IST1P53990 364 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 TPD52P55327 224 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 POU4F3Q15319 338 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 GGTA1PQ4G0N0 100 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF628Q5EBL2 1059 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 HLA-DQA1Q5Y7H0 255 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ANKRD26P1Q6NSI1 321 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 ACAD11Q709F0 780 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 GALNT10Q86SR1 603 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 TAGAPQ8N103 731 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 LIX1Q8N485 282 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 SLC15A4Q8N697 577 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 WDSUB1Q8N9V3 476 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 OR7G2Q8NG99 324 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 LINC01560Q8TB33 94 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 TMBIM1Q969X1 311 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 SARAFQ96BY9 339 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 EFHD2Q96C19 240 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 WDYHV1Q96HA8 205 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 SH3GL2Q99962 352 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 KLHDC3Q9BQ90 382 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 MRPL57Q9BQC6 102 aaKnown RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 G6PC3Q9BUM1 346 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 METTL7AQ9H8H3 244 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 PFDN4Q9NQP4 134 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 CCM2LQ9NUG4 571 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 CNIH4Q9P003 139 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 UTS2RQ9UKP6 389 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 EXO1Q9UQ84 846 aaKnown RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 DLGAP4Q9Y2H0 992 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 RPH3AQ9Y2J0 694 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-211ENST00000491581 WIF1Q9Y5W5 379 aa8.12□□□□□ -1.11
HDAC3-211ENST00000491581 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 A0A1W2PPR1 153 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 C1orf226A1L170 272 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 OR6C76A6NM76 312 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SHISA8B8ZZ34 492 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 G3V2L1 256 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 PCDH7O60245 1069 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 HCN1O60741 890 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 WDR1O75083 606 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 OTCP00480 354 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 HPNP05981 417 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SNRPAP09012 282 aaKnown RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 CT45A8P0DMV1 189 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 CT45A9P0DMV2 189 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 EFNA1P20827 205 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 DEKP35659 375 aaKnown RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SERPINB9P50453 376 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 RNF144AP50876 292 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 PLCXD2Q0VAA5 305 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 MAP4K2Q12851 820 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ILF2Q12905 390 aaKnown RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SLC29A2Q14542 456 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 CT45A2Q5DJT8 189 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SH2D4BQ5SQS7 431 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TIGD3Q6B0B8 471 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 VASNQ6EMK4 673 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ARSKQ6UWY0 536 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 GPRIN3Q6ZVF9 776 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 GCNT2Q8N0V5 402 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TP53INP1Q96A56 240 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 CTHRC1Q96CG8 243 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 OTUB1Q96FW1 271 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 EGLN2Q96KS0 407 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ADOQ96SZ5 270 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 NPAS1Q99742 590 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TUBA1CQ9BQE3 449 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 PELOQ9BRX2 385 aaKnown RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TXLNGYQ9BZA5 131 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ACKR4Q9NPB9 350 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 DNAJB12Q9NXW2 375 aaKnown RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 PSD3Q9NYI0 1048 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 GIMAP2Q9UG22 337 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF180Q9UJW8 692 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms