RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RPS3AP61247 264 aaKnown RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 HKDC1Q2TB90 917 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 WDR74Q6RFH5 385 aaPredicted RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 SNX29P2Q8IUI4 249 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 C11orf65Q8NCR3 313 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 HUS1BQ8NHY5 278 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 MAL2Q969L2 176 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 ZHX1-C8orf76Q96EF9 292 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 SEMA6CQ9H3T2 930 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 SYNDIG1Q9H7V2 258 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 ANKHQ9HCJ1 492 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 PRM3Q9NNZ6 103 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 VPS4AQ9UN37 437 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 RNF6Q9Y252 685 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 SH3BGRLO75368 114 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 ABCB1P08183 1280 aaPredicted RBP21.42■■□□□ 1.02
USF3-203ENST00000491165 DUSP3P51452 185 aaPredicted RBP21.42■■□□□ 1.02
USF3-203ENST00000491165 GAB1Q13480 694 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 MED27Q6P2C8 311 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 SLC38A4Q969I6 547 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 MACROD1Q9BQ69 325 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 AIF1LQ9BQI0 150 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 COPS4Q9BT78 406 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 CEP250Q9BV73 2442 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 C1GALT1Q9NS00 363 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 PILRAQ9UKJ1 303 aa21.42■■□□□ 1.02
USF3-203ENST00000491165 TLCD2A6NGC4 264 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 OR1F1O43749 312 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 ETHE1O95571 254 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 CTSBP07858 339 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 CYP4F2P78329 520 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 SPIN4Q56A73 249 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.41■■□□□ 1.02
USF3-203ENST00000491165 FRMPD2BQ6IN97 320 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 PIP4P1Q86T03 277 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 PLXDC1Q8IUK5 500 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 ZDHHC12Q96GR4 267 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 KCNC2Q96PR1 638 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 TOR4AQ9NXH8 423 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 ZNF282Q9UDV7 671 aaPredicted RBP21.41■■□□□ 1.02
USF3-203ENST00000491165 A8MU76 341 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 ADAMDEC1O15204 470 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 NTRK1P04629 796 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 SQSTM1Q13501 440 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 DEFB110Q30KQ9 67 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 PAGE2Q7Z2X7 111 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 C19orf47Q8N9M1 422 aaKnown RBP21.41■■□□□ 1.02
USF3-203ENST00000491165 OR4A15Q8NGL6 344 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 COQ8BQ96D53 544 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 DSN1Q9H410 356 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 SNX7Q9UNH6 387 aa21.41■■□□□ 1.02
USF3-203ENST00000491165 AGRPO00253 132 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 TNFRSF11BO00300 401 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 NTN3O00634 580 aaPredicted RBP21.4■■□□□ 1.02
USF3-203ENST00000491165 ZW10O43264 779 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 GGT2P36268 569 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 CLK1P49759 484 aaKnown RBP21.4■■□□□ 1.02
USF3-203ENST00000491165 SEPHS1P49903 392 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 SNRPNP63162 240 aaKnown RBP21.4■■□□□ 1.02
USF3-203ENST00000491165 PLEKHG7Q6ZR37 379 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 RCBTB1Q8NDN9 531 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 SPPL2AQ8TCT8 520 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 CHTF18Q8WVB6 975 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 PSD2Q9BQI7 771 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 SARGQ9BW04 601 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 TESMINQ9Y4I5 508 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 LYVE1Q9Y5Y7 322 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 LOC105369274A0A096LPK9 316 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 LOC102723532A0A0G2JNH3 316 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 TMEM229AB2RXF0 380 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 MAGEA8P43361 318 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 GSSP48637 474 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 SELENOWP63302 87 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 LRRC74AQ0VAA2 488 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 TBCEQ15813 527 aaPredicted RBP21.4■■□□□ 1.02
USF3-203ENST00000491165 TMEM71Q6P5X7 295 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 DGLUCYQ7Z3D6 616 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 VN1R4Q7Z5H5 301 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 OR4N4Q8N0Y3 316 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 MCFD2Q8NI22 146 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 MYDGFQ969H8 173 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 OR2A5Q96R48 311 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 AICDAQ9GZX7 198 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 DCSTAMPQ9H295 470 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 INIPQ9NRY2 104 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 PLCXD1Q9NUJ7 323 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 SH3BP4Q9P0V3 963 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 PSORS1C1Q9UIG5 152 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 PCDHGA4Q9Y5G9 962 aa21.4■■□□□ 1.02
USF3-203ENST00000491165 GNG14A0A1W2PPG7 69 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 TRBC2A0A5B9 178 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 RNASET2O00584 256 aaKnown RBP21.39■■□□□ 1.01
USF3-203ENST00000491165 TGFBR1P36897 503 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 PDX1P52945 283 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 TUBA1BP68363 451 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 KCNAB1Q14722 419 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 CCDC157Q569K6 752 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 Q6ZPB1 254 aaPredicted RBP21.39■■□□□ 1.01
USF3-203ENST00000491165 TUBA1AQ71U36 451 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 KRT78Q8N1N4 520 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms