RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RHOXF2BP0C7M4 288 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 TMIGD3P0DMS9 266 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 CSNK2A2P19784 350 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 FEN1P39748 380 aaKnown RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 NAGLUP54802 743 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 TRAF3Q13114 568 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 SNTA1Q13424 505 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 EXOSC7Q15024 291 aaKnown RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 TSNAXIP1Q2TAA8 658 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 PRICKLE4Q2TBC4 344 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 GGTA1PQ4G0N0 100 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 TMEM81Q6P7N7 255 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 ENPP6Q6UWR7 440 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 TAOK1Q7L7X3 1001 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 COMMD6Q7Z4G1 85 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 PLD6Q8N2A8 252 aaKnown RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 OR4F6Q8NGB9 312 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 OR14L1PQ8NHC6 308 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 LINC01560Q8TB33 94 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 ZPLD1Q8TCW7 415 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 KLHL29Q96CT2 875 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 MBD6Q96DN6 1003 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 OMA1Q96E52 524 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 DTNBP1Q96EV8 351 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 NSUN5Q96P11 429 aaKnown RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 GALNT9Q9HCQ5 603 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 NMRK1Q9NWW6 199 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 ZNF780BQ9Y6R6 833 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 NINQ8N4C6 2090 aa16.21■□□□□ 0.19
YIPF3-208ENST00000490447 HRNRQ86YZ3 2850 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 NIPBLQ6KC79 2804 aaeCLIP16.21■□□□□ 0.19
YIPF3-208ENST00000490447 SNPHO15079 494 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 ICOSLGO75144 302 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 CBR3O75828 277 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 GOSR1O95249 250 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 OTCP00480 354 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 S1PR1P21453 382 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 CPA2P48052 419 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 ALDH9A1P49189 494 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 DCAF7P61962 342 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 SLC7A5Q01650 507 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 MAP4K2Q12851 820 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 FAM111BQ6SJ93 734 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 SCIMPQ6UWF3 145 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 ADCY4Q8NFM4 1077 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 SELENOMQ8WWX9 145 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 NODALQ96S42 347 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 FAIM2Q9BWQ8 316 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 RBM24Q9BX46 236 aaKnown RBP16.2■□□□□ 0.18
YIPF3-208ENST00000490447 ACSS3Q9H6R3 686 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 ZBTB26Q9HCK0 441 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 PFDN4Q9NQP4 134 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 MAT2BQ9NZL9 334 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 EHD3Q9NZN3 535 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 PRODH2Q9UF12 536 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 FETUBQ9UGM5 382 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 SNX6Q9UNH7 406 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 PLLPQ9Y342 182 aa16.2■□□□□ 0.18
YIPF3-208ENST00000490447 PRRC2AP48634 2157 aaKnown RBP16.2■□□□□ 0.18
YIPF3-208ENST00000490447 C2orf72A6NCS6 295 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 PRAMEF25A6NGN4 478 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 SRYQ05066 204 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 DEFB113Q30KQ7 82 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 LUZP2Q86TE4 346 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 IFNEQ86WN2 208 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 C9orf106Q8NAJ2 232 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 OR52R1Q8NGF1 315 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 RDH11Q8TC12 318 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 HGDQ93099 445 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 TMCO6Q96DC7 493 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ZFP3Q96NJ6 502 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 TM9SF2Q99805 663 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 SFXN3Q9BWM7 321 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ACBD3Q9H3P7 528 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 BRF2Q9HAW0 419 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 SERHLQ9NQF3 203 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 NINJ2Q9NZG7 142 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 CES1P1Q9UKY3 287 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 EXO1Q9UQ84 846 aaKnown RBP16.19■□□□□ 0.18
YIPF3-208ENST00000490447 AKAP6Q13023 2319 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 CLCA1A8K7I4 914 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ESRRBO95718 433 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 PDYNP01213 254 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 CPN1P15169 458 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 FOSL1P15407 271 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 CNTFP26441 200 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ADAM8P78325 824 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 CKAP4Q07065 602 aaKnown RBP16.19■□□□□ 0.18
YIPF3-208ENST00000490447 DESI1Q6ICB0 168 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 SYT10Q6XYQ8 523 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 MMP21Q8N119 569 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 TUBA1CQ9BQE3 449 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 FARSBQ9NSD9 589 aaKnown RBP16.19■□□□□ 0.18
YIPF3-208ENST00000490447 JKAMPQ9P055 326 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ZNF639Q9UID6 485 aa16.19■□□□□ 0.18
YIPF3-208ENST00000490447 ABCA4P78363 2273 aa16.18■□□□□ 0.18
YIPF3-208ENST00000490447 FRG2CA6NGY1 282 aa16.18■□□□□ 0.18
YIPF3-208ENST00000490447 UGT2B11O75310 529 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms