RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ROPN1Q9HAT0 212 aaPredicted RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 WBP11Q9Y2W2 641 aaKnown RBP16.03■□□□□ 0.16
SEC13-218ENST00000490283 LIPGQ9Y5X9 500 aa16.03■□□□□ 0.16
SEC13-218ENST00000490283 SLC28A1O00337 649 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 RGS14O43566 566 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 PPM1BO75688 479 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 CBX7O95931 251 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 CELA3AP09093 270 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 GRNP28799 593 aaKnown RBP16.02■□□□□ 0.16
SEC13-218ENST00000490283 NTSP30990 170 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 KRT20P35900 424 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 PPICP45877 212 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 PSPHP78330 225 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 PCLAFQ15004 111 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 ZNF628Q5EBL2 1059 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 WDR93Q6P2C0 686 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 TRABD2AQ86V40 505 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 OR5M9Q8NGP3 310 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 OR9A2Q8NGT5 310 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 OMA1Q96E52 524 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 C11orf24Q96F05 449 aaPredicted RBP16.02■□□□□ 0.16
SEC13-218ENST00000490283 METTL2AQ96IZ6 378 aaKnown RBP16.02■□□□□ 0.16
SEC13-218ENST00000490283 STMN4Q9H169 189 aaPredicted RBP16.02■□□□□ 0.16
SEC13-218ENST00000490283 PNPLA3Q9NST1 481 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 LGALS13Q9UHV8 139 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 DTX4Q9Y2E6 619 aa16.02■□□□□ 0.16
SEC13-218ENST00000490283 POLR3HQ9Y535 204 aaPredicted RBP16.02■□□□□ 0.16
SEC13-218ENST00000490283 NOTCH2Q04721 2471 aa16.02■□□□□ 0.15
SEC13-218ENST00000490283 FRG2CA6NGY1 282 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 AZIN1O14977 448 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 WDR1O75083 606 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 TRIM3O75382 744 aaPredicted RBP16.01■□□□□ 0.15
SEC13-218ENST00000490283 SEC22BO75396 215 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 ABCB1P08183 1280 aaPredicted RBP16.01■□□□□ 0.15
SEC13-218ENST00000490283 NEFHP12036 1026 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 DRD5P21918 477 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 ACVR2AP27037 513 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 CHRNB4P30926 498 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 PTGER4P35408 488 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 DUSP2Q05923 314 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 CLEC6AQ6EIG7 209 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 B3GNT6Q6ZMB0 384 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 IKBIPQ70UQ0 350 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 NUP54Q7Z3B4 507 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 BANPQ8N9N5 519 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 AENQ8WTP8 325 aaKnown RBP16.01■□□□□ 0.15
SEC13-218ENST00000490283 KAT2AQ92830 837 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 FAM111AQ96PZ2 611 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 ANGPTL4Q9BY76 406 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 PROK2Q9HC23 129 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 EML4Q9HC35 981 aaKnown RBP16.01■□□□□ 0.15
SEC13-218ENST00000490283 ACKR4Q9NPB9 350 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 MYNNQ9NPC7 610 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 FIS1Q9Y3D6 152 aa16.01■□□□□ 0.15
SEC13-218ENST00000490283 FAM47E-STBD1D6RA91 191 aa16■□□□□ 0.15
SEC13-218ENST00000490283 COQ9O75208 318 aa16■□□□□ 0.15
SEC13-218ENST00000490283 TRAPPC6AO75865 159 aa16■□□□□ 0.15
SEC13-218ENST00000490283 SLITRK5O94991 958 aa16■□□□□ 0.15
SEC13-218ENST00000490283 HOXD4P09016 255 aaPredicted RBP16■□□□□ 0.15
SEC13-218ENST00000490283 RFPL3SP0C7P2 107 aa16■□□□□ 0.15
SEC13-218ENST00000490283 GABRA1P14867 456 aa16■□□□□ 0.15
SEC13-218ENST00000490283 ELAVL4P26378 380 aaKnown RBP16■□□□□ 0.15
SEC13-218ENST00000490283 CASP3P42574 277 aa16■□□□□ 0.15
SEC13-218ENST00000490283 EMDP50402 254 aa16■□□□□ 0.15
SEC13-218ENST00000490283 NCBP2P52298 156 aaKnown RBP eCLIP16■□□□□ 0.15
SEC13-218ENST00000490283 PMPCAQ10713 525 aa16■□□□□ 0.15
SEC13-218ENST00000490283 TOMM20Q15388 145 aa16■□□□□ 0.15
SEC13-218ENST00000490283 EMC4Q5J8M3 183 aa16■□□□□ 0.15
SEC13-218ENST00000490283 NOXRED1Q6NXP6 359 aa16■□□□□ 0.15
SEC13-218ENST00000490283 TICAM1Q8IUC6 712 aa16■□□□□ 0.15
SEC13-218ENST00000490283 OR10Q1Q8NGQ4 319 aa16■□□□□ 0.15
SEC13-218ENST00000490283 NEIL3Q8TAT5 605 aa16■□□□□ 0.15
SEC13-218ENST00000490283 TMCO6Q96DC7 493 aa16■□□□□ 0.15
SEC13-218ENST00000490283 DTNBP1Q96EV8 351 aa16■□□□□ 0.15
SEC13-218ENST00000490283 GATA5Q9BWX5 397 aaPredicted RBP16■□□□□ 0.15
SEC13-218ENST00000490283 LRTM1Q9HBL6 345 aa16■□□□□ 0.15
SEC13-218ENST00000490283 C1orf109Q9NX04 203 aa16■□□□□ 0.15
SEC13-218ENST00000490283 ALKBH4Q9NXW9 302 aa16■□□□□ 0.15
SEC13-218ENST00000490283 TAS2R9Q9NYW1 312 aa16■□□□□ 0.15
SEC13-218ENST00000490283 KLRF1Q9NZS2 232 aa16■□□□□ 0.15
SEC13-218ENST00000490283 C15orf38-AP3S2A0A0A6YYH1 394 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 TO15178 435 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 ZNF500O60304 480 aaPredicted RBP15.99■□□□□ 0.15
SEC13-218ENST00000490283 PLOD3O60568 738 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 ABCB7O75027 752 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 SPAG7O75391 227 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 ERN1O75460 977 aaKnown RBP15.99■□□□□ 0.15
SEC13-218ENST00000490283 REM1O75628 298 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 SNRPB2P08579 225 aaKnown RBP15.99■□□□□ 0.15
SEC13-218ENST00000490283 IL12BP29460 328 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 GCKP35557 465 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 TRPC1P48995 793 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 GTF3C1Q12789 2109 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 DUSP8Q13202 625 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 SNTA1Q13424 505 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 CEBPEQ15744 281 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 BICRALQ6AI39 1079 aa15.99■□□□□ 0.15
SEC13-218ENST00000490283 FAM71E1Q6IPT2 247 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms