RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SLC44A5Q8NCS7 719 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PROKR1Q8TCW9 393 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 WBP1Q96G27 269 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SFXN2Q96NB2 322 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 RCHY1Q96PM5 261 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DDOQ99489 341 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CENPKQ9BS16 269 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 NACAP1Q9BZK3 213 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 API5Q9BZZ5 524 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 NDEL1Q9GZM8 345 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 NSRP1Q9H0G5 558 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FOXP1Q9H334 677 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DCTPP1Q9H773 170 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CISD1Q9NZ45 108 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 LHX3Q9UBR4 397 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SH3TC1Q8TE82 1336 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF840PA6NDX5 716 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MANSC4A6NHS7 340 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 C15orf62A8K5M9 175 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 IQCF5A8MTL0 148 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GOLGA8SH3BPF8 625 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PRRG1O14668 218 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 BIRC5O15392 142 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 POLR2DO15514 142 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 LATO43561 262 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NDUFA10O95299 355 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 FGFR1OPO95684 399 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HMBSP08397 361 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HOXB2P14652 356 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ARSBP15848 533 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CA6P23280 308 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NDST1P52848 882 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TUBA1BP68363 451 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PPP1R8Q12972 351 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MTX1Q13505 466 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CTTNQ14247 550 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GANABQ14697 944 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ICAM4Q14773 271 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC153Q494R4 210 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ARMC12Q5T9G4 340 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AGAP7PQ5VUJ5 663 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 METTL11BQ5VVY1 283 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ATL3Q6DD88 541 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 EMBQ6PCB8 327 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TUBA1AQ71U36 451 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 LONP2Q86WA8 852 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 LRRC49Q8IUZ0 686 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 FBXO39Q8N4B4 442 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TRPV3Q8NET8 790 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OR13J1Q8NGT2 312 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OR52I2Q8NH67 350 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 UBLCP1Q8WVY7 318 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 IFT81Q8WYA0 676 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 FAM46BQ96A09 425 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF707Q96C28 371 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TM4SF19Q96DZ7 209 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AGAP4Q96P64 663 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OLFM3Q96PB7 478 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM43Q9BTV4 400 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SLC7A5P2Q9GIP4 190 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 XKR8Q9H6D3 395 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SMYD3Q9H7B4 428 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PARVBQ9HBI1 364 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SLC52A3Q9NQ40 469 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PDGFCQ9NRA1 345 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ZCCHC3Q9NUD5 404 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 UFSP2Q9NUQ7 469 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OSER1Q9NX31 292 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SIGLEC8Q9NYZ4 499 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ONECUT1Q9UBC0 465 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SLC9A2Q9UBY0 812 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NARFQ9UHQ1 456 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 B3GALT5Q9Y2C3 310 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AKAP11Q9UKA4 1901 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 IGLV5-52A0A0A0MRZ9 124 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NPEPPSL1A6NEC2 478 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CCT8L1PA6NM43 557 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 FAM220BPB1ANY3 271 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OR1F1O43749 312 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HCN1O60741 890 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MTRF1O75570 445 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NQO1P15559 274 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ENGP17813 658 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TNNI3P19429 210 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 EFNA1P20827 205 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ATP6V1C1P21283 382 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MSR1P21757 451 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PTBP1P26599 531 aaKnown RBP eCLIP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AMTP48728 403 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TMED10P49755 219 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SGSHP51688 502 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AIF1P55008 147 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SNRPEP62304 92 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MYL5Q02045 173 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GRB14Q14449 540 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM132DQ14C87 1099 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AANATQ16613 207 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SMUG1Q53HV7 270 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GFRALQ6UXV0 394 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CCNI2Q6ZMN8 369 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms