RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 F10P00742 488 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 PLA2G2AP14555 144 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 GPC1P35052 558 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 MC3RP41968 323 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 MRPL19P49406 292 aaKnown RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 FOXK1P85037 733 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 PRR5P85299 388 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 DUSP8Q13202 625 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 EXOSC7Q15024 291 aaKnown RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 NTRK2Q16620 822 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 TBCELQ5QJ74 424 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 SPINK14Q6IE38 97 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 ANKRD26P1Q6NSI1 321 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 LYPD8Q6UX82 237 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 TMEM64Q6YI46 380 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 ACAD11Q709F0 780 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 MAVSQ7Z434 540 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 GLB1L3Q8NCI6 653 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 GALNT11Q8NCW6 608 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 PSD4Q8NDX1 1056 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 VPS37AQ8NEZ2 397 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 PAQR8Q8TEZ7 354 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 KAT2AQ92830 837 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 MIB2Q96AX9 1013 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 MOAP1Q96BY2 351 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 CCDC28BQ9BUN5 200 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 DUSP26Q9BV47 211 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 ITPAQ9BY32 194 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 DPY30Q9C005 99 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 CLMPQ9H6B4 373 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 CCDC134Q9H6E4 229 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 WDR55Q9H6Y2 383 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 C3orf14Q9HBI5 128 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 SH2D2AQ9NP31 389 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 TMEM45AQ9NWC5 275 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 ANKRD10Q9NXR5 420 aa10.23□□□□□ -0.77
CPSF7-212ENST00000489728 GPR55Q9Y2T6 319 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-212ENST00000489728 A0A1W2PRB8 838 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 E9PBE3 544 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 J3QKU1 62 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 UPK1AO00322 258 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 TP53I11O14683 189 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 UBDO15205 165 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 POLR3GO15318 223 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 EDF1O60869 148 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 DIAPH2O60879 1101 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ERN1O75460 977 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 LAMP1P11279 417 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ABCD3P28288 659 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 KIR3DL1P43629 444 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 NR0B1P51843 470 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 MRPS22P82650 360 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 HSPB3Q12988 150 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 RPS6KA2Q15349 733 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZNHIT3Q15649 155 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 VPS26BQ4G0F5 336 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 SLC9B1Q4ZJI4 515 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 PDCD4Q53EL6 469 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ANXA8L1Q5VT79 327 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZNF324BQ6AW86 544 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 TMEM81Q6P7N7 255 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZCCHC12Q6PEW1 402 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 BHLHB9Q6PI77 547 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 TMEM107Q6UX40 140 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 IL20RBQ6UXL0 311 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 BNC2Q6ZN30 1099 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 C16orf47Q6ZP98 133 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 GK5Q6ZS86 529 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZNF551Q7Z340 670 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 GALNTL5Q7Z4T8 443 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 FBXW8Q8N3Y1 598 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 CISD2Q8N5K1 135 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 KRTCAP2Q8N6L1 136 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZFP62Q8NB50 900 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 SFXN5Q8TD22 340 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 GRHL3Q8TE85 626 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 FAR1Q8WVX9 515 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 HOXB13Q92826 284 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 CIDECQ96AQ7 238 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 FRMD6Q96NE9 622 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 MS4A4EQ96PG1 132 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZBTB18Q99592 522 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 SLX1AQ9BQ83 275 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 LMF2Q9BU23 707 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 NXF5Q9H1B4 397 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 LIN28AQ9H9Z2 209 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 FOLH1BQ9HBA9 442 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 TCF7L2Q9NQB0 619 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 SDR39U1Q9NRG7 319 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 SACM1LQ9NTJ5 587 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 FAM120CQ9NX05 1096 aaKnown RBP10.22□□□□□ -0.77
CPSF7-212ENST00000489728 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 LUZP4Q9P127 313 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 DTX4Q9Y2E6 619 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 NPFFR2Q9Y5X5 522 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms