RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PRAMEF8Q5VWM4 474 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 PRAMEF7Q5VXH5 474 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 TSLPQ969D9 159 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 MAL2Q969L2 176 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 NCLNQ969V3 563 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 RNF145Q96MT1 663 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 STACQ99469 402 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 SPSB2Q99619 263 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 CCM2LQ9NUG4 571 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
VPS26A-205ENST00000489656 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 ANGPT4Q9Y264 503 aa13.21□□□□□ -0.29
VPS26A-205ENST00000489656 CNOT1A5YKK6 2376 aaKnown RBP13.21□□□□□ -0.3
VPS26A-205ENST00000489656 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
VPS26A-205ENST00000489656 DLGAP3O95886 979 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 IFNA16P05015 189 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 CD63P08962 238 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 OR12D1P0DN82 309 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
VPS26A-205ENST00000489656 SOX11P35716 441 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 DUSP8Q13202 625 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 GNA13Q14344 377 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 RCN1Q15293 331 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 MAPK11Q15759 364 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 CRB2Q5IJ48 1285 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 HEPHL1Q6MZM0 1159 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 LAPTM4BQ86VI4 370 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 TMPRSS12Q86WS5 348 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 CDRT4Q8N9R6 151 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
VPS26A-205ENST00000489656 OR14A16Q8NHC5 309 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 NFKBIDQ8NI38 313 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-205ENST00000489656 SLC38A5Q8WUX1 472 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 ANKRA2Q9H9E1 313 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 PISDQ9UG56 409 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 ANAPC2Q9UJX6 822 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
VPS26A-205ENST00000489656 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 PRAMEF27A3QJZ7 478 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 C17orf105B2RV13 164 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 IDSB3KWA1 339 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 C9J4A7 227 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 SLC30A4O14863 429 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 DYRK3O43781 588 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 PRAMEF2O60811 474 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 ACP2P11117 423 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 EMDP50402 254 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 ERFP50548 548 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 CLCN2P51788 898 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 ZNF267Q14586 743 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 EXOSC7Q15024 291 aaKnown RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 NSDHLQ15738 373 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 LCN10Q6JVE6 187 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 CBLL1Q75N03 491 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM151BQ8IW70 566 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 SIMC1Q8NDZ2 872 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 OR5D16Q8NGK9 328 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 CANT1Q8WVQ1 401 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 RAB8BQ92930 207 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 MR1Q95460 341 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 TMEM19Q96HH6 336 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 ART5Q96L15 291 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 LMF2Q9BU23 707 aaKnown RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 EFHD1Q9BUP0 239 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 PIGUQ9H490 435 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 EQTNQ9NQ60 294 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 EXD2Q9NVH0 621 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 RPS6KA6Q9UK32 745 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 SAMD4AQ9UPU9 718 aaKnown RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 HEMK1Q9Y5R4 338 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-205ENST00000489656 DMXL1Q9Y485 3027 aa13.19□□□□□ -0.3
VPS26A-205ENST00000489656 PMS2P1A4D2B8 440 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms