RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MKL2Q9ULH7 1088 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 FER1L5A0AVI2 2057 aa20.21■□□□□ 0.83
SMC4-221ENST00000489573 TCRBV16S1A1N1A0A5B0 115 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 SYNDIG1LA6NDD5 238 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 PROB1E7EW31 1015 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 NME6O75414 186 aaPredicted RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 TIPRLO75663 272 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 AGR2O95994 175 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 ZGLP1P0C6A0 271 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 RAP2AP10114 183 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 NR2F1P10589 423 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 CDK4P11802 303 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 TNNI3P19429 210 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 ITIH1P19827 911 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 S1PR1P21453 382 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 AGXTP21549 392 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 PTDSS1P48651 473 aaKnown RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 CRYBA2P53672 197 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 ELOAQ14241 798 aaKnown RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 ZNF267Q14586 743 aaPredicted RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 CRB2Q5IJ48 1285 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 EXOSC6Q5RKV6 272 aaKnown RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 ATAD3BQ5T9A4 648 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 LRRC74BQ6ZQY2 392 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 RAB11FIP2Q7L804 512 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 OVCH1Q7RTY7 1134 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 PATL1Q86TB9 770 aaKnown RBP20.2■□□□□ 0.82
SMC4-221ENST00000489573 CDRT4Q8N9R6 151 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 PLPP5Q8NEB5 264 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 DEFB124Q8NES8 71 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 CNPPD1Q9BV87 410 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 ADPRHL2Q9NX46 363 aa20.2■□□□□ 0.82
SMC4-221ENST00000489573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.19■□□□□ 0.82
SMC4-221ENST00000489573 PRAMEF27A3QJZ7 478 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 RECKO95980 971 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 IFNA14P01570 189 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 ACP2P11117 423 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 FCGR1AP12314 374 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 HOXB6P17509 224 aaKnown RBP20.19■□□□□ 0.82
SMC4-221ENST00000489573 PGDP52209 483 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 EFNA3P52797 238 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 CRISP3P54108 245 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 FUT5Q11128 374 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 DUSP8Q13202 625 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 SYPL1Q16563 259 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 NKG7Q16617 165 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 CYBRD1Q53TN4 286 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 RPS26P11Q5JNZ5 115 aaPredicted RBP20.19■□□□□ 0.82
SMC4-221ENST00000489573 DCAF12Q5T6F0 453 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 ERMP1Q7Z2K6 904 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 WDR53Q7Z5U6 358 aaPredicted RBP20.19■□□□□ 0.82
SMC4-221ENST00000489573 ANKFN1Q8N957 763 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 SLC16A11Q8NCK7 471 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 LRTOMTQ8WZ04 291 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 SLC9A6Q92581 669 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 FKBP10Q96AY3 582 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 CHID1Q9BWS9 393 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 ULBP3Q9BZM4 244 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 PNO1Q9NRX1 252 aaKnown RBP20.19■□□□□ 0.82
SMC4-221ENST00000489573 EXD2Q9NVH0 621 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 LIPT1Q9Y234 373 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 KCNE3Q9Y6H6 103 aa20.19■□□□□ 0.82
SMC4-221ENST00000489573 C17orf105B2RV13 164 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 TPST1O60507 370 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 PDE9AO76083 593 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 PGM3O95394 542 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 ALOX5P09917 674 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 SSTR4P31391 388 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 GCKP35557 465 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 ETV5P41161 510 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 LIMK1P53667 647 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 FUT7Q11130 342 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 ZNF155Q12901 538 aaPredicted RBP20.18■□□□□ 0.82
SMC4-221ENST00000489573 NSDHLQ15738 373 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 HES3Q5TGS1 186 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 LAPTM4BQ86VI4 370 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 TMEM151BQ8IW70 566 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 BBS10Q8TAM1 723 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 NRG4Q8WWG1 115 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 TAMM41Q96BW9 452 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 SLC35A4Q96G79 324 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 SLC26A1Q9H2B4 701 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 YY1AP1Q9H869 796 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 GIN1Q9NXP7 522 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 PRDM4Q9UKN5 801 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 ERVK-19Q9WJR5 959 aa20.18■□□□□ 0.82
SMC4-221ENST00000489573 VSTM2BA6NLU5 285 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 M0QX08 132 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 HRKO00198 91 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 SUV39H1O43463 412 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 DYRK3O43781 588 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 PRAMEF2O60811 474 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 ALBP02768 609 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 OPN1SWP03999 348 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 KLK3P07288 261 aaPredicted RBP20.17■□□□□ 0.82
SMC4-221ENST00000489573 FASP25445 335 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 EIF3IQ13347 325 aaKnown RBP20.17■□□□□ 0.82
SMC4-221ENST00000489573 ELAVL1Q15717 326 aaKnown RBP20.17■□□□□ 0.82
SMC4-221ENST00000489573 DUSP5Q16690 384 aa20.17■□□□□ 0.82
SMC4-221ENST00000489573 PRAMEF8Q5VWM4 474 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms